20 bioinformatics scientist jobs at 17 companies in Everett, MA

2mo
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Sr. Bioinformatics Scientist
Boston, Massachusetts, United States
$145k-$170k/yr HybridFull Time
Foundation Medicine
Foundation Medicine: Molecular profiling for personalized cancer treatment and research.
1+ YOEMaster's +3 yrs or PhD +1 yr; experience with NGS, cancer genomics, biomarker analysis, bioinformatics tools (NCBI, UCSC Genome Browser, IGV), scripting in R/Python; supervisory and regulatory submission experience.
NCBI, UCSC Genome Browser, IGV, R, Python, Next-Generation Sequencing (NGS)
2w
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Senior Bioinformatics Scientist
Boston, Massachusetts, United States
OnsiteFull Time
Cellular Intelligence
Cellular Intelligence: An AI-native TechBio building foundation models of cell signaling to advance regenerative medicine and therapeutic discovery.
3+ YOEPhD or equivalent experience preferred,3+ years developing bioinformatics methods and pipelines for single-cell/spatial transcriptomics; strong Python and/or R skills; experience with Nextflow or Snakemake, containers, version control, and applying LLMs; mentorship experience.
Python, R, Nextflow, Snakemake, LLMs
1w
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Bioinformatics Senior Scientist-Biology
Cambridge, Massachusetts, United States
OnsiteFull Time
Zealand Pharma
Zealand PharmaNasdaq Copenhagen: ZEAL: Discovers and develops peptide-based medicines for metabolic and rare diseases.
4+ YOEPhD in bioinformatics/computational biology/genomics with postdoc experience (or MS+8yrs). 4+ years industry/translational experience, multi-omics analysis, pipeline development, reproducible workflows, ML/AI exposure, strong communication.
2w
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Application Scientist, Bioinformatics
Lausanne or Boston or Athens or Philippines
RemoteFull Time, Contract
Saphetor
Saphetor: Platform for genomic variant interpretation and clinical diagnostics.
Master’s/PhD in bioinformatics or related field, hands-on NGS analysis experience, variant classification knowledge, strong communication and commercial skills, English proficiency.
VarSome, API, NGS
5d
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Senior Scientist I - Bioinformatics, Biotherapeutics and Genetic Medicine
Worcester, Massachusetts, United States
$97k-$184k/yr OnsiteFull Time
AbbVie
AbbVieNYSE: ABBV: Develops and sells innovative pharmaceutical and biopharmaceutical medicines.
0+ YOEBioinformatics expertise for designing digital workflows, developing visualizations, and integrating lab data; proficiency in SQL and at least one programming language; experience with bioinformatics tools and large dataset management.
SnapGene, Geneious, Genedata Biologics, Pipebio, Benchling, Microsoft Excel, SQL, Python, R, Power BI, Tableau, D3.js, Spotfire, Pandas, NumPy, scikit-learn, Matplotlib, Seaborn, Streamlit
2mo
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Senior Scientist - Oligo Bioinformatics (Billerica, Massachusetts, US, 01821)
Billerica, Massachusetts, United States
$113k-$169k/yr OnsiteFull Time
Merck
MerckXETRA: MRK: A science and technology providing healthcare, life science, and electronics solutions.
3+ YOEPhD in Chemistry, Chemical Engineering or other Science or Engineering discipline with 3+ years of direct experience in the oligonucleotide field.
BLAST, RNA folding, siRNA design tools
2w
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Scientist
Cambridge, Massachusetts, United States
$110k-$166k/yr OnsiteFull Time
Alnylam Pharmaceuticals
Alnylam PharmaceuticalsNASDAQ: ALNY: Develops RNAi therapeutics to treat rare and common diseases.
8+ YOEPhD (or MS+8yrs) with experience in LC-MS/MS method development, metabolite/lipid sample prep, omics data analysis, and bioinformatics; familiarity with Python/R and strong communication skills.
LC-MS/MS, triple-quadrupole, high-resolution accurate mass, Sciex QTRAP, Thermo Orbitrap, Python, R, Claude Code, Codex
2mo
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Principal Data Scientist - Immunology - (2 positions)
Titusville or Cambridge or Raritan or Spring House or San Diego
$117k-$201k/yr HybridFull Time
Johnson & Johnson
Johnson & JohnsonNYSE: JNJ: Develops and manufactures pharmaceutical drugs and medical devices.
5+ YOEPrincipal Data Scientist with bioinformatics/biomedical data expertise; 5+ years health informatics; semantic tech, ontologies, knowledge graphs; PhD or Master preferred.
Semantic Web, SPARQL, RDF, OWL, Graph Databases, Neo4j, Amazon Neptune, REST, GraphQL, Docker, CI/CD, Jenkins, GitLab, Azure DevOps, SQL, NoSQL, Proteomics, Genomics
2w
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Scientist, Metabolomics
Cambridge, Massachusetts, United States
$110k-$166k/yr OnsiteFull Time
Alnylam
AlnylamNasdaq: ALNY: Developing and commercializing RNA interference (RNAi) therapeutics for diseases.
8+ YOEPhD in related field (or MS with 8+ years), extensive LC-MS/MS assay development and sample prep experience, metabolomics data analysis, familiarity with Python/R and omics bioinformatics, strong communication and publication record.
LC-MS/MS, Sciex QTRAP, Thermo Orbitrap, Python, R, Claude Code, Codex
1mo
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Pathology Computational Scientist
Boston, Massachusetts, United States
$94k-$137k/yr OnsiteFull Time
Mass General Brigham: Provides integrated medical care, research, and clinical training services.
Experience in microbiome bioinformatics and machine learning, advanced deep learning skills, Python and PyTorch experience preferred, Git and SLURM familiarity, ability to manage large biomedical datasets and contribute to publications/grants.
Python, PyTorch, Git, SLURM
2mo
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Senior Scientist
Waltham, Massachusetts, United States
$120k-$150k/yr OnsiteFull Time
BPGbio
BPGbio: AI-powered biopharmaceutical developing biology-first therapeutics and diagnostics.
4+ YOEPhD in proteomics or related field; 4+ years industry proteomics/translational biomarker experience; mass spectrometry expertise; collaboration with cross-functional teams; data interpretation skills.
Mass spectrometry, LC-MS/MS, Proteomics platforms, Bioinformatics tools
3mo
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Computational Scientist, Protein Engineering
Boston, Massachusetts, United States
$118k-$138k/yr OnsiteFull Time
Manifold Bio
Manifold Bio: Designing tissue-targeted protein therapeutics using AI and in vivo screening.
4+ YOEPhD and/or 4+ years in computational biology, bioinformatics, protein engineering, or related field; strong Python, data pipelines, Unix, and antibody engineering experience; experience with MPRA/NGS data; collaboration skills.
Python, Unix, Git, NGS data analysis
3w
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Computational Scientist I - Scalable Services
Burlington, Massachusetts, United States
$88k-$124k/yr OnsiteFull Time
Broad Institute
Broad Institute: Conducts genomic research to understand and treat human diseases.
0+ YOEPhD required in computer science, mathematics, bioinformatics, physics or related; strong computational and data analysis skills; excellent communication; experience developing software; 0+ years experience.
3d
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Senior/Principal Scientist, Synthetic Biology
Woburn, Massachusetts, United States
OnsiteFull Time
Fieldstone Bio
Fieldstone Bio: Provides microbial sensors for high-resolution environmental and mineral mapping.
2+ YOEPhD in bioengineering/chemical engineering/microbiology or related plus 2+ years industry experience; expertise in microbial engineering, DNA design, transcriptomics, and sensor development.
RNA-sequencing, Electronic Lab Notebook (ELN), bioinformatics
3w
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Associate Quality Scientist (DNA Sequencing Analyst)
Watertown, Massachusetts, United States
$65k-$70k/yr HybridFull Time
Addgene
Addgene: Operates a global nonprofit repository for sharing genetic research materials.
BA/BS in biology required (MS preferred); experience with molecular biology and sequence analysis; familiarity with NGS and bioinformatic processes; strong organization and communication skills.
Google Workspace, MS Office
2mo
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Senior Scientist – Virology (Contractor)
Cambridge, Massachusetts, United States
$45-$75/hr OnsiteContract
Transfyr
Transfyr: Building physical AI infrastructure for scientific research and automation.
3+ YOEPhD or MS with 3+ years experience in Virology/Molecular Biology; wet-lab expertise; reverse genetics; strong documentation and reproducibility.
PCR, RT-qPCR, Cloning, Nucleic Acid Extraction, Sequencing, Bioinformatics, Python, R
1mo
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Data Scientist Contractor, Computational Biology
Cambridge, Massachusetts, United States
OnsiteContract
CAMP4 Therapeutics
CAMP4 TherapeuticsNASDAQ: CAMP: Develops regulatory RNA-based therapeutics to treat genetic diseases.
3+ YOEPhD in bioinformatics/computational biology/systems biology, 3+ years industry or postdoc experience; strong RNA-seq, scRNA-seq, and long-read sequencing (Nanopore/PacBio) analysis; Python/R, Linux, HPC/AWS proficiency; reproducible research skills.
Python, R, Linux, AWS, Nanopore, PacBio, High-performance computing clusters, RAPTM Platform
1w
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Senior Scientist in ML Methods for Spatial Biology
Cambridge or Princeton
$129k-$180k/yr OnsiteFull Time
Bristol Myers Squibb
Bristol Myers SquibbNew York Stock Exchange: BMY: Develops and distributes innovative medicines for serious diseases.
2+ YOEAdvanced degree in ML/bioinformatics/computational biology, 2+ years postdoc or 5–7+ years industry/academic experience depending on degree; experience with spatial omics or bioimaging, publication record, ML framework experience, and strong communication skills.
scikit-learn, PyTorch, TensorFlow, Docker, Git
2mo
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Sr Sci 1, R&D
Watertown, Massachusetts, United States
$145k-$170k/yr OnsiteFull Time
Seismic Therapeutic
Seismic Therapeutic: Developing machine learning-enabled biologics for autoimmune and inflammatory diseases.
3+ YOEPh.D. in Immunology or related field; 3–5+ years translational autoimmunity experience; bioanalytical assays; regulatory experience; strong data analysis and publication record.
Flow cytometry, Mass cytometry, ELISA, MSD, Single-cell RNA-seq, Proteomics, Bioinformatics