21 clinical data engineer jobs at 17 companies in Boston, MA
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Clinical Data Engineer
Boston, Massachusetts, United States
$110k-$130k/yr HybridFull Time
2+ YOE2+ years data engineering with health/physiology data; advanced Python/SQL; AWS/Snowflake; signal processing and statistics; cross-functional work.
Python, SQL, AWS, Snowflake
1w
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Field Clinical Engineer
Burlington, Massachusetts, United States
$100k-$115k/yr FieldFull Time
Bachelor's in biomedical engineering or related, clinical/engineering experience preferred, ability to analyze device performance data, strong troubleshooting and communication skills, willingness to join 24/7 on-call rotation.
1mo
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Clinical Data Engineering Lead
Cambridge, Massachusetts, United States
$176k-$328k/yr OnsiteFull Time
10+ YOEMaster's (PhD preferred) in CS/Bioinformatics/Data Engineering,10+ years in clinical data engineering in pharma/biotech, expertise with CDISC/SDTM/ADaM, FAIR principles, GxP compliance, leadership and stakeholder management.
Foundry, Domino, Snowflake, POSIT Connect, RShiny, Dash, Spotfire, R, Python, Java, shell, Linux, HPC, CDISC, SDTM, ADaM
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Senior Scientific Data Engineer
Cambridge, Massachusetts, United States
HybridFull Time
8+ YOE8+ years as a Data Engineer or similar; 8+ years Python/SQL; project leadership; cross-functional delivery; dashboards; pre-clinical data experience; strong communication.
Python, SQL, React, Streamlit, Jupyter Notebook, ELN, LIMS
3d
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Integration Engineer, Clinical Data Path
North America or United States or Boston
$140k-$180k/yr RemoteFull Time
Experience implementing protocols from specifications, debugging networking and memory issues, and operating software in restricted infrastructure. Requires precise security documentation and fail-closed handling of patient data.
Python, FastAPI, pytest, pynetdicom, pydicom, DICOM PS3.15, DICOM PS3.18, DICOMweb STOW-RS, HL7 v2, MLLP, AWS, Amazon S3, Amazon SQS, Amazon Cognito, Amazon ECS, AWS Fargate, AWS WAF, Application Load Balancer (ALB), Amazon CloudWatch, AWS Secrets Manager, Terraform, Docker, shell, Mirth, Rhapsody, Corepoint, Orthanc, dcm4che, DCMTK, PACS, VNA
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Lead Bioinformatics Engineer (Hyrbid)
Marlborough, Massachusetts, United States
$155k-$175k/yr HybridFull Time
7+ YOEBS with 7+ yrs, MS with 4+ yrs, or PhD with 3+ yrs in clinical/biological data; 5+ yrs in regulated life sciences; 4+ yrs software/engineering.
Python, JavaScript, TypeScript, R, Terraform, AWS CDK, Docker, Git, GitLab CI/CD, GitHub CI/CD, Flask, React, Bootstrap, Jupyter, R Markdown, ggplot2, tidyverse, Plotly, matplotlib, Tableau, d3.js
1mo
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Senior Machine Learning Engineer
Boston or Brooklyn
$170k-$205k/yr HybridFull Time
4+ YOE4+ years building and deploying production ML systems, deep expertise in an ML engineering area, strong Python development with testing and CI/CD, familiarity with clinical/EHR data, monitoring and model reliability, and strong communication.
Python, CI/CD, EHR
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Clinical Supply Optimization Analyst
Cambridge, Massachusetts, United States
OnsiteFull Time
Engineering background (business, mathematical, or biomedical); analytical, project management and client-relationship skills; fluent English; US citizen or Green Card holder; open to ~10% travel and extended onboarding in Belgium.
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Principal Signal Processing Engineer - Cardiac Ablation Solutions
Newton, Massachusetts, United States
$153k-$229k/yr OnsiteFull Time
7+ YOEDevelop and validate real-time high-performance signal processing algorithms and production software for cardiac ablation devices; experience in DSP, algorithm verification, and clinical data analysis required.
Python, C++, Linux
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Principal Signal Processing Engineer - Cardiac Ablation Solutions
Newton, Massachusetts, United States
$153k-$229k/yr OnsiteFull Time
3+ YOEAdvanced signal processing experience designing and implementing high-performance production code; 5+ years typical; proficiency in Python, C++, Linux; experience with ML, verification/validation, and clinical data analysis.
Python, C++, Linux
3d
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Lead Computer Systems Validation Engineer I (Clinical & R&D)
Waltham, Massachusetts, United States
$110k-$126k/yr HybridFull Time
7+ YOEBachelor’s degree in computer science, life sciences, engineering, or related field with 9+ years in digital quality; master’s with 7+ years considered. Requires GxP, CSV, quality systems, compliance, data integrity, and team leadership experience.
Learning Management System (LMS), Veeva DMS, TrackWise, TrackWise Digital, ValGenesis, GAMP 5, Artificial Intelligence (AI), Quality Risk Management, Change Control, CAPAs, SOPs
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Machine Learning Scientist – Clinical Prediction
Boston or San Diego or United States
$148k-$186k/yr HybridFull Time
3+ YOEMS in chemistry/bio/chemical engineering or PhD/equivalent; 3+ years relevant experience; strong Python and deep-learning fine-tuning skills; clinical dataset experience; data science and engineering best practices; familiarity with Docker, CUDA, Kubernetes, and Weights & Biases.
Python, Docker, CUDA, Kubernetes, Weights & Biases, HPC
2d
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Principal Analyst, Operations and Health Systems Research
Cambridge or Research Triangle Park
$141k-$188k/yr HybridFull Time
5+ YOERequires 5+ years in pharma, biotech, technology, or healthcare, with expertise in data science, machine learning, operations research, data engineering, Python/R, clinical data, modeling, and software development practices.
Electronic Health Records (EHR), Python, R, NumPy, pandas, SciPy, statsmodels, scikit-learn, Google OR-Tools, TensorFlow, PyTorch, PySpark, tidyverse, sparklyr, mlr, tidymodels
2w
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Principal Statistical Programmer
Cambridge or Boston
$181k-$205k/yr HybridFull Time
Alnylam Pharmaceuticals, Inc.: A biopharmaceutical developing medicines for serious diseases.
8+ YOEBachelor’s degree in engineering, information technology, information systems, computer science, or related field, plus 8 years of statistical programming experience with SAS and clinical trial data.
SAS, SAS Macro, SQL, SAS/SQL, SAS/GRAPH, SAS/STAT, CDISC, SDTM, ADaM, eSub
1w
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Director, Analytics Systems
Boston or New York City or Paris
RemoteFull Time
6+ Mgmt6+ years managing analytics engineering teams; experience with analytics engineering, data pipelines, BI tooling; regulated industry or clinical/diagnostics experience; strong communication and stakeholder management.
dbt, SQLMesh, Snowflake, Databricks, Argo, Airflow, Superset, Looker, Tableau
2mo
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Adjunct Instructor in Generative AI in Clinical Decision Support
Waltham, Massachusetts, United States
RemotePart Time
3+ YOEAdvanced degree (Masters or Ph.D.) in Computer Science, Health Informatics, Data Science, Engineering or related field; strong AI healthcare knowledge; 3+ years AI deployment experience; programming in Python or R; online teaching experience; strong online communication.
Python, R, Moodle
1w
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Manager, EDC Administration
Cambridge or United States
$126k-$166k/yr RemoteFull Time
5+ YOEMaster’s in computer science, engineering, or related field with 5 years’ experience, or bachelor’s with 7 years’ experience. Requires clinical systems, data warehouse, SOP, ticketing, and clinical trial experience.
Medidata Rave, Oracle Inform, Oracle CTMS, Medidata CTMS, Jira, ServiceNow, CTMS, IRT, MDM, CDISC, 21 CFR Part 11, ICH GCP
4w
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VP of Operations
Needham, Massachusetts, United States
OnsiteFull Time
10+ YOESenior operating leader to run day-to-day operations, own finance and metrics, build scalable systems, design org and hiring, and partner across clinical, data, product, and engineering.
1mo
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Translational Post Doctoral Researcher - Agentic AI for Neurodegeneration
Titusville or Raritan or Spring House or San Diego or Cambridge
$79k-$128k/yr HybridFull Time, Contract
PhD (recent) in neuroscience or related field; deep neurodegeneration knowledge; hands-on experience with ≥2 modalities (imaging, pathology, omics, clinical); familiarity with agentic AI/LLMs; proficiency in Python and ML/data engineering; strong communication.
LangGraph, DSPy, Python, Neo4j, Neptune, AWS, Azure
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