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23 clinical data engineer jobs at 18 companies in New York City, NY

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Data Engineer, Clinical Operations
Princeton, New Jersey, United States
$88k-$106k/yr OnsiteFull Time
Bristol Myers Squibb
Bristol Myers SquibbNYSE: BMY: Develops and manufactures innovative prescription biopharmaceutical medicines.
5+ YOE5+ years data engineering experience with Databricks, cloud-native data platforms, Python/SQL/Spark, GenAI/LLM experience, data pipeline and governance expertise for clinical/cross-study data.
Generative AI, Databricks, Databricks Delta Lake, Databricks Unity Catalog, Databricks Workflows, Databricks Mosaic AI, MLflow, Python, SQL, Spark, PySpark, RAG, vector embeddings
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Data Engineer, Clinical Operations
Princeton, New Jersey, United States
$88k-$106k/yr OnsiteFull Time
Bristol Myers Squibb
Bristol Myers SquibbNew York Stock Exchange: BMY: Develops and distributes innovative medicines for serious diseases.
5+ YOE5+ years data engineering experience with cloud platforms, Databricks (Delta Lake, Unity Catalog), Python, SQL, Spark/PySpark, GenAI/LLM (RAG, embeddings), and building production-grade ETL/ELT pipelines and data products.
Generative AI (GenAI), Databricks, Databricks Delta Lake, Databricks Unity Catalog, Databricks Workflows, Databricks Mosaic AI, MLflow, Python, SQL, Spark, PySpark, RAG, LLM
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2mo
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Senior Data Engineer
United States or Menlo Park or New York City or Seattle
$150k-$220k/yr RemoteFull Time
Verantos
Verantos: Generates high-accuracy real-world evidence for clinical and regulatory use
8+ YOE8+ years data engineering experience, production Snowflake and dbt experience, strong Python skills, building resilient pipelines on high-variance clinical data, observability and automation mindset, cross-functional communication.
Snowflake, dbt, Python, AWS, EHR, Observational Medical Outcomes Partnership Common Data Model (OMOP CDM), HL7, FHIR
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3w
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Senior Manager, Artificial Intelligence Data Engineer
Tarrytown or Armonk or Warren
$151k-$246k/yr OnsiteFull Time
Regeneron Pharmaceuticals
Regeneron PharmaceuticalsNASDAQ: REGN: Discovers and develops medicines for serious diseases.
5+ YOE5+ years building and leading data engineering solutions in life sciences/healthcare; expertise with clinical data models, data governance, and automation; strong Python/SQL skills and cloud/data platform experience.
Snowflake, Databricks, Redshift, BigQuery, Python, SQL, R, Bitbucket, AWS, Azure, GCP, CDISC, HL7, FHIR
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Associate Director, Full Stack Clinical Platform Engineer
Princeton, New Jersey, United States
$206k-$268k/yr HybridFull Time
Kardigan
Kardigan: Developing precision medicines to treat and cure cardiovascular disease.
5+ YOEAdvanced degree required; 5–7+ years designing data engineering solutions in life sciences or healthcare. Requires clinical data infrastructure, cloud platforms, Python, SQL, R, ML pipelines, DevOps, and regulatory standards expertise.
Snowflake, Databricks, Amazon Redshift, BigQuery, Python, SQL, R, AWS, Azure, GCP, Docker, Kubernetes, Bitbucket, GitHub, CI/CD, MLOps, LLMOps, RAG, HIPAA, GDPR, 21 CFR Part 11, CDISC, HL7, FHIR
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Data Analyst, MoBI
New York, New York, United States
$52k-$70k/yr HybridFull Time
Child Mind Institute
Child Mind Institute: Mental health care and research for children and families
2+ YOEBachelor's in cognitive science/neuroscience/biomedical engineering or equivalent, 2+ years clinical/research experience, and proficiency in MATLAB, R and/or Python; experience with multimodal data collection and curation.
MATLAB, R, Python, MRI, EEG, actigraphy, eye-tracking
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Data Analyst, MoBI
New York, New York, United States
$52k-$70k/yr HybridFull Time
Child Mind Institute
Child Mind Institute: Clinical care and research for children's mental health.
2+ YOEBachelor's degree (or equivalent) in cognitive science/neuroscience/biomedical engineering, 2+ years clinical or research experience, and proficiency in MATLAB, R, or Python; experience with MRI/EEG and multimodal data preferred.
MATLAB, R, Python, MRI, EEG, Actigraphy, Eye-tracking
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Health System Director, Clinical Engineering
New York City or Brooklyn or Suffolk County or Florida
$152k-$263k/yr OnsiteFull Time
NYU Langone Health
NYU Langone Health: Academic medical system providing comprehensive patient care and education.
5+ YOE5+ MgmtBachelor's in biomedical engineering or healthcare administration, 5+ years progressive hospital management experience, strong communication, data/analytics and CMMS experience, regulatory and compliance expertise.
Computerized Maintenance Management Systems (CMMS), HER, dashboards, analytics
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3mo
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Staff Software Engineer (Clinical Fit)
New York, New York, United States
$210k-$270k/yr HybridFull Time
Zocdoc
Zocdoc: Online platform for searching and booking healthcare appointments.
Build data-intensive analytics platforms; mentor engineers; collaborate with product, design, and analytics; work with GenAI tools.
GenAI, Data Analytics, Backend Services, Frontend Visualization
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Staff Software Engineer - Data Platform (HL7/FHIR)
Austin or San Francisco or New York City
$120k-$300k/yr HybridFull Time
R1 RCM
R1 RCM: Revenue cycle management solutions for healthcare providers.
10+ YOEBachelor's in CS or similar,10+ years software/data engineering,5+ years thought leadership,experience with clinical data and claims lifecycle,Apache Spark,Python,Scala,Databricks,cloud platforms,FHIR/HL7 and web service standards.
Apache Spark, Python, Scala, Databricks, Epic, FHIR, HL7, Azure, GCP, AWS, XML, XSD, SOAP, JSON, REST
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Senior Software Engineer, Clinical
Chicago or New York City or Denver
RemoteFull Time
ECP
ECP: Software platform for senior living and care management.
Requires deep TypeScript, Node, and React experience; AI-assisted development; domain-driven design; production testing and on-call experience; tenant data modeling and query optimization; and product collaboration.
TypeScript, Node, React, AWS, SQL Server, ColdFusion, AngularJS, Playwright
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2mo
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Senior Machine Learning Engineer
Boston or Brooklyn
$170k-$205k/yr HybridFull Time
VideaHealth
VideaHealth: AI-powered diagnostic software for dental imaging and practice management.
4+ YOE4+ years building and deploying production ML systems, deep expertise in an ML engineering area, strong Python development with testing and CI/CD, familiarity with clinical/EHR data, monitoring and model reliability, and strong communication.
Python, CI/CD, EHR
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Lead Bioinformatics Engineer
Marlborough or Addison or Secaucus
$155k-$175k/yr RemoteFull Time
Quest Diagnostics
Quest DiagnosticsNYSE: DGX: Provides clinical laboratory diagnostic testing and health information services.
3+ YOEBS+7 / MS+4 / PhD+3 experience with clinical/biological data, 5+ years in regulated life sciences, 4+ years software development, cloud (AWS) and bioinformatics experience, programming in Python/JavaScript/R, SQL/NoSQL, Terraform, Docker.
SQL, NoSQL, JSON based RESTful APIs, AWS, Terraform, AWS CDK, Microsoft Visio, DrawIO, Python, javascript/typescript, R, Docker, Python Flask, React Native, Bootstrap, R Markdown, Jupyter Notebook, ggplot2, tidyverse, Plotly, matplot lib, Tableau, d3.js, Git, Gitlab CI/CD, Github CI/CD
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2w
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Director, Analytics Systems
Boston or New York City or Paris
RemoteFull Time
Beacon Biosignals
Beacon Biosignals: Provides AI-powered EEG monitoring and analytics for brain health.
6+ Mgmt6+ years managing analytics engineering teams; experience with analytics engineering, data pipelines, BI tooling; regulated industry or clinical/diagnostics experience; strong communication and stakeholder management.
dbt, SQLMesh, Snowflake, Databricks, Argo, Airflow, Superset, Looker, Tableau
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2w
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Global Clinical Supply - Process Steward - Packaging - Hybrid
West Point or Schachen or Rahway
$117k-$184k/yr HybridFull Time
Merck & Co.
Merck & Co.NYSE: MRK: Develops and manufactures prescription medicines, vaccines, and animal health products.
5+ YOEBachelor's in science or engineering with 5+ years, or master's with 3+ years; SAP supply chain expertise, 5+ years in supply chain or manufacturing, 3+ years in SAP production execution and master data, and GXP compliance experience.
SAP, SAP PI Sheets, SAP Business Technology Platform
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Director of Care Strategy
New York City, New York, United States
HybridFull Time
Nourish
Nourish: Provides insurance-covered telehealth nutrition counseling with registered dietitians.
10+ YOE10+ years experience in clinical operations, proven people management, building clinical workflows and protocols, cross-functional collaboration with product/engineering/data, and data-driven decision making for care models.
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General Application: Don't see what you're looking for? Apply here!
United States or New York City
OnsiteFull Time
ConcertAI
ConcertAI: AI-powered precision medicine and real-world data analytics.
Open general application for multiple roles across engineering, data science, clinical research, product, and related functions; seeking candidates passionate about AI, RWE, and oncology innovation.
Cara, Precision Suite, TeraRecon, CancerLinQ
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Translational Post Doctoral Researcher - Agentic AI for Neurodegeneration
Titusville or Raritan or Spring House or San Diego or Cambridge
$79k-$128k/yr HybridFull Time, Contract
Johnson & Johnson
Johnson & JohnsonNYSE: JNJ: Develops and manufactures pharmaceutical drugs and medical devices.
PhD (recent) in neuroscience or related field; deep neurodegeneration knowledge; hands-on experience with ≥2 modalities (imaging, pathology, omics, clinical); familiarity with agentic AI/LLMs; proficiency in Python and ML/data engineering; strong communication.
LangGraph, DSPy, Python, Neo4j, Neptune, AWS, Azure
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3mo
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Associate Director Statistical Programming - Pharmacometrics
Tarrytown or Warren
$176k-$287k/yr OnsiteFull Time
Regeneron
RegeneronNasdaq: REGN: Discovers and manufactures medicines for serious diseases.
10+ YOELead PMX programming with 10+ years in clinical trial data; Master in Statistics/CS/Math/Engineering/Life Science; strong SAS, R/Python; on-site 4 days at NY/NJ locations; project and people leadership.
SAS, SAS Studio, R, Python, MS Excel, SAS Programming
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3w
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Managing Associate General Counsel - Privacy
San Francisco or New York City
$210k-$280k/yr HybridFull Time
Abridge
Abridge: Automates medical documentation through AI-powered speech analysis
15+ YOE15+ years of privacy and health-tech legal experience, JD and active U.S. bar membership, deep HIPAA and US state privacy law knowledge, team leadership, and ability to counsel product and engineering on privacy for AI and clinical data.
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