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6 data scientist machine learning engineer jobs at 5 companies in Boston, MA

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Senior Machine Learning Engineer / Data Scientist
Boston, Massachusetts, United States
$96k-$215k/yr OnsiteFull Time
Flagship Pioneering
Flagship Pioneering: Conceives, creates, and builds life science platform companies
1+ YOEAdvanced degree in CS/ML/related, proven experience building LLM/RAG/agentic systems, expertise with Python, LangChain, Hugging Face Transformers, PyTorch, knowledge-graph and vector DBs; multi-omics experience a plus.
Python, LangChain, Hugging Face Transformers, PyTorch
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Machine Learning Scientist — Agentic data pipelines
Boston or Boston
$148k-$210k/yr HybridFull Time
Iambic Therapeutics
Iambic Therapeutics: Develops novel medicines using an AI-driven discovery platform.
Master's or PhD in a computational STEM field; strong Python; experience with LLM APIs and agent patterns; familiarity with biomedical data; data engineering and ETL.
Python, LLM APIs, Agent frameworks, Cloud (AWS), Docker, Kubernetes, ETL
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Senior Machine Learning Engineer / Data Scientist
Boston, Massachusetts, United States
$96k-$215k/yr OnsiteFull Time
ProFound Therapeutics
ProFound Therapeutics: Discovering novel proteins to develop first-in-class medicines.
1+ YOEPhD (1–3 yrs industry) or MS (4–6 yrs) in a related field; hands-on experience building LLM/RAG/graph/agent systems; proficiency in Python and ML frameworks; experience with knowledge graphs and vector DBs; strong communication.
Python, LangChain, Hugging Face Transformers, PyTorch
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Machine Learning Scientist – Clinical Prediction
Boston or San Diego or United States
$148k-$186k/yr HybridFull Time
Iambic Therapeutics
Iambic Therapeutics: Develops novel medicines using an AI-driven discovery platform.
3+ YOEMS in chemistry/bio/chemical engineering or PhD/equivalent; 3+ years relevant experience; strong Python and deep-learning fine-tuning skills; clinical dataset experience; data science and engineering best practices; familiarity with Docker, CUDA, Kubernetes, and Weights & Biases.
Python, Docker, CUDA, Kubernetes, Weights & Biases, HPC
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Associate Director, Machine Learning (Core Algorithms)
Boston, Massachusetts, United States
$200k-$245k/yr OnsiteFull Time
WHOOP
WHOOP: Wearable technology for personalized health and performance tracking.
8+ YOE4+ Mgmt8+ years in ML or applied data science with consumer product experience; 4+ years managing ML scientists/engineers; experience scaling production ML orgs, cross-functional program leadership, and strong communication skills.
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Lead Research Scientist - Machine Learning
Woburn, Massachusetts, United States
$174k-$220k/yr OnsiteFull Time
Systems & Technology Research
Systems & Technology Research: Develops advanced technology for national security and defense applications.
8+ YOEMS with 8+ years or PhD with 5+ years in applied math, physics, electrical engineering, CS, or data science; ML/AI expertise; PyTorch/TensorFlow/JAX; data science tools; Python/C/C++; ability to lead teams and obtain security clearance.
PyTorch, JAX, TensorFlow, scikit-learn, Pandas, Matplotlib, Python, C/C++
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