15 hpc jobs at 10 companies in Indiana

3mo
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Postdoctoral Fellow, Biology
Bloomington, Indiana, United States
OnsiteFull Time
Indiana University
Indiana University: Public university system providing undergraduate and graduate degree programs.
PhD in computational biology, bioinformatics, computer science, or related field; experience leading computational research; Python, HPC, reproducible pipelines; strong communication and teamwork; population genetics preferred.
Python, High Performance Computing, PyTorch, TensorFlow
4w
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Bioinformatics Analyst
Indianapolis, Indiana, United States
$51k-$54k/yr OnsiteFull Time
Indiana University
Indiana University: Public university providing higher education and academic research.
Bachelor's in related field required; master's preferred. Experience with high-throughput NGS and multi-omics, reproducible pipelines, programming (R/Python/Bash), Linux/HPC, and strong communication and analytical skills.
R, Python, Bash, Linux/Unix, Snakemake, Nextflow, HPC, cloud computing
2mo
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Post-doctoral Computational Chemist, Advanced Molecular Design
Indianapolis, Indiana, United States
$58k-$123k/yr OnsiteFull Time
Eli Lilly and Company
Eli Lilly and CompanyNYSE: LLY: Researches and manufactures medicines for human health.
Ph.D. required by Aug 2026; authorized to work in the US (no visa sponsorship). Expertise in quantum mechanics, molecular dynamics, free energy methods, scripting (Python), HPC, and cheminformatics; strong collaboration and communication skills.
Schrödinger, MOE, Gaussian, Orca, GAMESS, OpenMM, AMBER, CHARMM, GROMACS, Desmond, Python, RDKit, OpenEye, ChemAxon, MDAnalysis, NumPy, SciPy, pandas, GitHub, GitLab, HPC
1mo
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Principal Quantum Engineer
West Lafayette, Indiana, United States
$143k-$275k/yr OnsiteFull Time
Microsoft
MicrosoftNASDAQ: MSFT: Develops software, services, devices, and cloud computing solutions.
3+ YOEDoctorate (or Master’s/Bachelor’s with additional years) in Physics, Engineering, or related field plus industry/R&D experience; experience with atomistic/materials modeling, DFT/MD, HPC and Python; ability to pass security/export screenings and verify citizenship/US-person status.
DFT, MD, HPC, Python
2mo
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Senior Director, AI Platforms
Irvine or Denver or Indianapolis or Grand Rapids or Lexington or Los Angeles or Louisville or Texas or San Francisco or United States
$218k-$225k/yr OnsiteFull Time
Trace3
Trace3: Provides IT consulting and technology solutions for enterprise digital transformation.
12+ YOE5+ MgmtBachelor's in CS/EE or related; 12+ years enterprise infrastructure experience with 5+ years designing and implementing production-scale AI/ML/HPC (multi-rack GPU) and 5+ years people leadership; familiarity with GPU compute, high-performance networking, scale-out storage, Kubernetes/Slurm/Run:ai, and AI security; willingness to travel up to 50%.
NVIDIA DGX, NVIDIA HGX, Cisco AI infrastructure, Dell PowerEdge XE, Super Micro, Lenovo ThinkSystem, HPE ProLiant, Cray, InfiniBand, RoCE, NVIDIA Spectrum-X, VAST, WEKA, DDN, Pure, NetApp ONTAP AI, Kubernetes, Slurm, Run:ai, NVIDIA Base Command, Mission Control, Anyscale, NVIDIA AI Enterprise, NCP
1mo
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Senior Systems Integration Engineer
Indianapolis, Indiana, United States
$87k-$165k/yr OnsiteFull Time
RTX
RTXNYSE: RTX: Provides advanced aerospace and defense systems and services.
5+ YOERequires U.S. citizenship and active transferable DoD Secret clearance, Bachelor's in STEM and 5+ years designing databases/SQL/metrics/dashboards, experience integrating tools and data workflows, familiarity with Agile and collaboration with cross-functional engineering teams.
SQL, Azure DevOps, JIRA, Kanban, Trello, Python, R, HPC
2w
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Senior Advisor, Agentic AI Solutions Engineer
Indianapolis, Indiana, United States
$129k-$209k/yr OnsiteFull Time
Eli Lilly and Company
Eli Lilly and CompanyNYSE: LLY: Researches and manufactures medicines for human health.
5+ YOEMaster's +5 years post-degree experience, 2+ years building ML/AI solutions in Python/R, experience with NumPy, pandas, PyTorch, scikit-learn, SQL, cloud and MLOps practices, strong strategic and communication skills.
Python, R, NumPy, pandas, PyTorch, scikit-learn, SQL, Git, containers, CI/CD, HPC, GPU, LangGraph, AutoGen, CrewAI, pgvector, Pinecone, Weaviate, MCP, LLM
2d
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Electrical Engineer
Crane, Indiana, United States
OnsiteFull Time
SAIC
SAICNASDAQ: SAIC: Provides government and defense clients with technology and engineering services.
2+ YOEBachelor’s degree in electrical engineering, 2+ years of experience, HWIL and real-time testing, electrical diagnostics, network protocols, and interim Secret clearance with ability to obtain Secret clearance.
Hardware-in-the-Loop (HWIL), iHawk, Speedgoat, RT Linux, Ethernet, HPC, MIL-STD
2mo
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Advisor - Data Architect, Data Foundry
San Diego or San Francisco or Boston or Louisville or Indianapolis
$152k-$244k/yr OnsiteFull Time
Eli Lilly and Company
Eli Lilly and CompanyNYSE: LLY: Researches and manufactures medicines for human health.
2+ YOEM.S. or PhD in a STEM field with relevant data architecture/engineering or scientific informatics experience (MS+6 yrs or PhD+2 yrs). Expertise in data modeling, lakehouse and platform architecture, knowledge graphs, semantic web standards, cloud and streaming data patterns.
Databricks, Snowflake, Spark, dbt, Kafka, Kinesis, Flink, Neo4j, Amazon Neptune, TigerGraph, TileDB, MongoDB, Pinecone, Weaviate, pgvector, Delta Lake, Unity Catalog, RDF, OWL, SPARQL, Protégé, Benchling, C, C++, Rust, SQL, LIMS, ELN, HPC
2w
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Postdoctoral Scientist, Biophysics
Indianapolis, Indiana, United States
$58k-$123k/yr OnsiteFull Time
Eli Lilly and Company
Eli Lilly and CompanyNYSE: LLY: Researches and manufactures medicines for human health.
Ph.D. in biophysical chemistry/biophysics/computational chemistry, strong biomolecular NMR and molecular dynamics experience, proficiency in Python and computational methods, authorized to work in the U.S.
Python, molecular dynamics, quantum mechanics, free energy calculations, AI, CNN, GNN, HPC, Cloud, NMR, cryo-EM, X-ray crystallography
2d
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Electrical Engineer
Crane, Indiana, United States
OnsiteFull Time
SAIC
SAICNYSE: SAIC: Provides engineering, IT, and mission support services to government.
2+ YOEBachelor's degree in Electrical Engineering or related discipline and 2+ years of experience with HWIL, tactical hardware, or real-time test systems. Interim Secret clearance required; ability to obtain Secret clearance.
Hardware-in-the-Loop (HWIL), Ethernet, iHawk, Speedgoat, RT Linux, High-Performance Computing (HPC), MIL-STD
3w
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Senior Engineer or Analyst (Multi-Discipline) (Job ID:4430)
Crane, Indiana, United States
OnsiteFull Time
Valkyrie Enterprises
Valkyrie Enterprises: Provides engineering and analysis services for defense weapon system development and testing.
5+ YOE5+ years related experience, engineering/project lead experience, ability to obtain DoD clearance, strong analytical and communication skills; HWIL, simulation, and modeling experience preferred.
Python, Matlab, C+, C#, Java, Hardware-in-the-Loop (HWIL), High-performance computing (HPC), Flight Motion Simulators (FMS), Anechoic Chambers, Scene Generator, Scene Projector, OPTISIG, XPATCH, Lucernhammer
2w
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Research Scientist | College of Engineering
Notre Dame, Indiana, United States
$70k-$80k/yr OnsiteFull Time
University of Notre Dame
University of Notre Dame: Private Catholic research university providing higher education and research.
3+ YOEPh.D. in engineering or related field,3+ years research experience,expertise in energy systems analysis,life cycle assessment,technoeconomic analysis,optimization,ML/Generative AI,strong technical writing and mentoring skills.
High-performance computing (HPC)
3w
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Linux Systems Administrator
Crane, Indiana, United States
HybridFull Time
ManTech
ManTech: Provides technology solutions for defense and intelligence agencies.
7+ YOE7+ years IT experience, 2+ years as systems administrator, Linux administration, virtualization, DISA STIG/RMF compliance, networking and hardware troubleshooting, ability to obtain DoD secret clearance.
VMWare ESXi, RedHat 7, RedHat 8, Ubuntu22, DISA STIG, RMF, High Performance Computing (HPC)
2d
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Snowflake Advanced AI Solution Lead
San Francisco or Milwaukee or Dallas or Columbus or Kirkland or Cincinnati or New York City or Cleveland or Oklahoma City or Austin or Albany or Chicago or St. Petersburg or Hartford or Pittsburgh or St. Louis or Miami or Sacramento or Raleigh or Minneapolis or Mountain View or Scottsdale or Morristown or Denver or Boston or Philadelphia or Des Moines or Overland Park or Los Angeles or Charlotte or Walnut Creek or Carmel or Seattle or Houston or Arlington or Atlanta or Redmond or Bentonville or Beaverton or Nashville or Detroit or San Diego
$80k-$294k/yr HybridFull Time
Accenture
AccentureNYSE: ACN: Global provider of management consulting and technology services.
5+ YOERequires 5+ years in machine learning engineering or science, 5+ years in computer science foundations, 3+ years in distributed systems, 2+ years with Snowflake Cortex AI and cloud AI/ML deployment, plus a bachelor's degree or equivalent experience.
Snowflake Cortex AI, Cortex Agents, Cortex Analyst, Cortex Search, Deep Learning, Generative AI, Large Language Models, DevOps, MLOps, LLMOps, HPC, Python, TensorFlow, PyTorch, LLM, C++, Java, R, SQL