25 lims engineer jobs at 15 companies in National City, CA

1mo
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Sr. Director, Lab Pipelines and LIMS
San Diego or South San Francisco
$243k-$273k/yr HybridFull Time
Veracyte
VeracyteNasdaq Stock Market LLC: VCYT: Public global cancer diagnostics providing molecular tests that help clinicians guide diagnosis and treatment.
12+ YOEBachelor's degree,12+ years software engineering experience including multi-team leadership, experience with LIMS and sequencing/secondary analysis pipelines, regulated environments (CLIA/CAP/FDA), strong stakeholder and communication skills.
LIMS, CI/CD
1w
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Staff Software Engineer, LIMS
San Diego, California, United States
$174k-$185k/yr OnsiteFull Time
San Diego Stealth Startup
San Diego Stealth Startup: San Diego climate-tech startup developing high-throughput diagnostic instrument platforms using advanced data processing.
7+ YOERequires 7+ years building software for clinical or molecular diagnostics labs, hands-on LIMS integration, sample-tracking data modeling, full-stack programming, regulated-environment experience, and a BS/MS or equivalent experience.
LIMS, Senaite, Bika, LabKey, OpenSpecimen, Benchling, LabWare, STARLIMS, LabVantage, Sapio, Git, CI/CD, Hamilton STAR, SPT Firefly, Thermo KingFisher, HL7 v2, FHIR, LIS, ASTM E1394, IHE, AWS, Microsoft Azure, GCP, EMR
2mo
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Lead Automation Engineer, MES & Digital Systems - Project Farma
Alabama or California or Colorado or District of Columbia or Illinois or Indiana or Massachusetts or Maryland or Missouri or North Carolina or New Jersey or New York or Ohio or Oregon or Pennsylvania or Texas or Virginia or Boston or Philadelphia or Chicago or Indianapolis or Columbus or St Louis or Kansas City or Raleigh or Durham or Houston or Dallas or Boulder or Portland or San Francisco or San Diego or Los Angeles
RemoteFull Time
Project Farma
Project Farma: Patient-focused biopharmaceutical consulting firm providing manufacturing strategy and execution for life-science companies.
9+ YOEBachelor's in engineering, 9+ years automation experience in GMP life sciences, MES/ERP/LIMS/CMMS integration expertise, URS/FRS/DS documentation experience, ISA-88/ISA-95 and GAMP 5 knowledge, willingness to travel and valid driver’s license.
MES, ERP, LIMS, CMMS, DCS, PLC, SCADA, historians, Data Repositories, eBR, RbE, eLogbooks, ISA-88, ISA-95, GAMP 5, 21 CFR Part 11, FAT, SAT, IQ/OQ, PQ
3w
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Senior Automation Engineer, R&D
San Diego or La Jolla
$78k-$156k/yr OnsiteFull Time
Abbott
AbbottNYSE: ABT: Global healthcare technology focused on life-changing medical innovations.
5+ YOEBachelor’s degree in engineering or biological sciences and 5+ years of product development experience. Requires automation engineering expertise, legal work authorization, and ability to travel 10%.
Hamilton Venus, HSL, LIMS
1mo
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Senior Automation Engineer, R&D
La Jolla, California, United States
$125k-$180k/yr RemoteFull Time
Exact Sciences
Exact SciencesNASDAQ: EXAS: Molecular diagnostics focused on cancer screening and tests.
5+ YOEBachelor's in engineering or biological sciences,5+ years product development experience,ability to develop and deploy laboratory automation,experience with automation integration and regulated environments.
LIMS, Hamilton Venus, HSL
3w
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Senior Automation Engineer, R&D
San Diego or La Jolla
$78k-$156k/yr OnsiteFull Time
Abbott
AbbottNYSE: ABT: Global healthcare technology focused on life-changing medical innovations.
5+ YOEBachelor’s degree in engineering, biological sciences, or a related field; 5+ years of product development experience; legal work authorization without current or future sponsorship.
Hamilton Venus, HSL, LIMS, liquid handler
1w
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Software Engineer
United States or Seattle or San Diego or Arlington or Washington
$140k-$200k/yr RemoteFull Time
Ohr
Ohr: Private industrial chemistry creating critical chemicals from abundant feedstocks for defense, mining, propulsion, and advanced materials.
4+ YOERequires 4–8 years of software engineering experience, a four-year computer science or engineering degree, production software experience, programming skills in Python or TypeScript, and experience building LLM-powered applications.
Python, TypeScript, LLM, AI APIs, LIMS
2d
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Principal Engineer 1, Data Platforms
San Diego, California, United States
$175k-$185k/yr OnsiteFull Time
Halozyme
HalozymeNasdaq: HALO: Public biopharmaceutical developing drug-delivery technologies, auto-injectors, and medicines for patients and pharmaceutical partners.
10+ YOE2+ MgmtBachelor’s degree and 10+ years in data engineering or platform architecture; 2+ years technical leadership; expertise in Microsoft Fabric, PySpark, T-SQL, Python, ELT/ETL, CI/CD, governance, and enterprise data platforms.
Microsoft Fabric, OneLake, Spark, SQL, Data Factory, Power BI, PySpark, T-SQL, Python, Databricks, Azure Synapse, Azure DevOps, GitHub Actions, Microsoft Purview, Unity Catalog, Master Control, Veeva, LIMS, ELN, Benchling, CTMS, EDC, HRIS
1mo
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QC Sr. Associate I (Software Developer Specialist) - Fixed Term
Oceanside, California, United States
$90k-$167k/yr OnsiteFull Time
Genentech
Genentech: U.S.-headquartered biotechnology discovering and developing medicines for people with serious and life-threatening diseases.
8+ YOEDegree in computer science or life sciences with extensive pharmaceutical software/QC experience; expert in Biovia, BPMN, cGMP, data integrity and validation; 8+ years industry experience preferred.
Biovia, BPMN, LIMS, ELN/LES
1w
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Group Leader
San Diego, California, United States
$70k-$90k/yr OnsiteFull Time
Eurofins BioPharma Product Testing
Eurofins BioPharma Product Testing: Global GMP laboratory network testing biologic and small-molecule medicines for pharmaceutical, biopharmaceutical, and medical-device companies.
2+ YOEBachelor’s degree in a relevant science or engineering field plus 2 years of relevant experience, or a master’s degree. Requires analytical testing, laboratory leadership, LIMS, and RNA therapeutic experience.
Laboratory Information Management Systems (LIMS), HPLC/UPLC, HRMS, CE, LC-UV, CAD, FLD, MS, IPRP, SEC, AEX, CGE, UV, DLS/ELS, ELISA, qPCR, ddPCR
2mo
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Management Consulting Delivery Specialist , Scientific and Laboratory Informatics
Orlando or Milwaukee or Herndon or Dallas or Columbus or Kirkland or Irvine or Cincinnati or New York or Cleveland or Oklahoma City or Austin or Albany or Chicago or Arlington or St. Petersburg or Hartford or Pittsburgh or St. Louis or Miami or Sacramento or Raleigh or Minneapolis or Scottsdale or Mountain View or Morristown or San Francisco or Denver or Boston or Philadelphia or Des Moines or Overland Park or Los Angeles or Charlotte or Walnut Creek or Carmel or Seattle or Houston or Atlanta or Redmond or Bentonville or Beaverton or Nashville or Detroit or San Diego
$54k-$196k/yr OnsiteFull Time
Accenture
AccentureNYSE: ACN: Global professional services delivering 360° value.
3+ YOE3+ years in scientific and laboratory informatics; Bachelor’s in a laboratory science, life science, computer science, or engineering; experience with laboratory solutions (LIMS, ELN, Benchling, LabWare, etc.) and consulting preferred; willing to travel up to 50%.
GenAI, Agentic SI, Agentic Lab Capabilities, Internet of Things (IoT), cloud, LIMS, ELN, CDS, SDMS, Benchling, Revvity Signals, Waters CDS/SDMS, Dotmatics, LabVantage, LabWare, SampleManager, Scitara, TetraScience
2mo
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Commercial Manufacturing Team Member (Vista, CA, US, 92081)
Vista, California, United States
$114k-$157k/yr OnsiteFull Time
Bachem
BachemSIX Swiss Exchange: BANB: Public Swiss CDMO developing and manufacturing peptide and oligonucleotide APIs for pharmaceutical and biotechnology companies worldwide.
4+ YOEBachelor's in chemistry/chemical engineering/pharmaceutical sciences required; 4+ years in production/QA/QC in pharma/chemical manufacturing; SAP, LIMS, Minitab, MS Office proficiency; GMP and CMC knowledge; Green Belt and PMP preferred.
Minitab, SAP, LIMS, Microsoft Office, Microsoft Project, Power BI, MasterControl, Microsoft SharePoint, ShareFile, Skype, HPLC, UPLC, LC-MS, MS, GC-MS, AAA, CHN
3w
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Manufacturing Engineering, AI Enablement Lead
San Diego, California, United States
$142k-$212k/yr OnsiteFull Time
Illumina
IlluminaNASDAQ: ILMN: Global leader in DNA sequencing and genomic technologies.
10+ YOERequires 10+ years in global operations or manufacturing, AI and automation fluency, senior stakeholder influence, life sciences manufacturing systems expertise, and experience leading global portfolios and end-to-end delivery.
RPA, Generative AI, Agentic AI, SAP EAM, Industry 4.0, Digital Twin, LIMS, UiPath, Azure OpenAI, Microsoft Copilot Studio, Anthropic, LLMs
2w
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Senior Analyst, Quality Assurance (Analytical)
San Diego, California, United States
$100k-$127k/yr OnsiteFull Time
Insmed
InsmedNasdaq: INSM: Global biopharmaceutical developing and commercializing medicines for patients with serious and rare diseases.
5+ YOEBachelor's degree in chemistry, engineering, life sciences, or related field and 5+ years of pharmaceutical or biotechnology QA experience. Requires gene therapy or biologics experience and cGMP compliance expertise.
21 CFR Part 11, Annex 11, FMEA, HPLC/UPLC, CE-SDS, ddPCR, ELISA, Veeva, LIMS, Chromeleon, BMRAM, Microsoft Word, Microsoft Excel, Microsoft PowerPoint, Microsoft Outlook
4d
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Technical Product Owner – Toxicology Systems
Spring House or La Jolla or Beerse
$94k-$152k/yr HybridFull Time
Johnson & Johnson Innovative Medicine
Johnson & Johnson Innovative MedicineNYSE: JNJ: Pharmaceutical organization creating medicines for patients in oncology, immunology, neuroscience and cardiopulmonary care.
5+ YOEBachelor's degree and 5+ years supporting scientific research platforms required. Requires scientific technology leadership, toxicology knowledge, and experience with data platforms, software engineering, APIs, cloud, and cross-functional delivery.
Python, R, SQL, REST APIs, CI/CD, RDKit, SMARTS, scikit-learn, TensorFlow, PyTorch, LIMS, ELN
4d
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Technical Product Owner – Toxicology Systems
Spring House or La Jolla or Beerse
$94k-$152k/yr HybridFull Time
Johnson & Johnson Innovative Medicine
Johnson & Johnson Innovative MedicineNYSE: JNJ: Pharmaceutical organization creating medicines for patients in oncology, immunology, neuroscience and cardiopulmonary care.
5+ YOEBachelor’s degree required; 5+ years supporting scientific research platforms. Requires data platform, analytics or ML delivery experience, toxicology literacy, and software/data engineering experience with Python or R, SQL, REST APIs, containers, CI/CD, and cloud environments.
Python, R, SQL, REST APIs, RDKit, SMARTS, scikit-learn, TensorFlow, PyTorch, LIMS, ELN, CI/CD
2mo
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Advisor - Data Architect, Data Foundry
San Diego or San Francisco or Boston or Louisville or Indianapolis
$152k-$244k/yr OnsiteFull Time
Eli Lilly and Company
Eli Lilly and CompanyNYSE: LLY: Uniting caring with discovery to make life better.
2+ YOEM.S. or PhD in a STEM field with relevant data architecture/engineering or scientific informatics experience (MS+6 yrs or PhD+2 yrs). Expertise in data modeling, lakehouse and platform architecture, knowledge graphs, semantic web standards, cloud and streaming data patterns.
Databricks, Snowflake, Spark, dbt, Kafka, Kinesis, Flink, Neo4j, Amazon Neptune, TigerGraph, TileDB, MongoDB, Pinecone, Weaviate, pgvector, Delta Lake, Unity Catalog, RDF, OWL, SPARQL, Protégé, Benchling, C, C++, Rust, SQL, LIMS, ELN, HPC