129 bioinformatics jobs at 67 companies in California

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Bioinformatics Analyst
La Jolla, California, United States
$74k-$84k/yr OnsiteFull Time
J. Craig Venter Institute
J. Craig Venter Institute: Conducts genomic research to improve human health and sustainability.
Bachelor's in biological or computational sciences, experience with sequencing data analysis, bioinformatics tools, coding (Python or R), UNIX proficiency, strong communication and organization skills.
Python, R, UNIX, Windows, Macintosh
1w
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Bioinformatics Engineer II
California, United States
$90k-$140k/yr RemoteFull Time
Tempus AI
Tempus AINASDAQ: TEM: Builds a data platform for AI-powered precision medicine diagnostics.
5+ YOEBachelor's degree with 5+ years, master's with 2+ years, or PhD in bioinformatics, computer science, or related field; Python, Linux, relational databases, Git, testing, and bioinformatics data expertise.
Python, Linux, MySQL, PostgreSQL, Microsoft SQL Server, Git, AWS, Azure, Google Cloud, Jira, Confluence, Bitbucket, Docker, Bamboo, Jenkins, AWS CodePipeline, FASTQ, BAM, VCF, GTF, ClinVar, HGMD, HGVS
1mo
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Bioinformatics Scientist
Scotts Valley, California, United States
$80k-$130k/yr OnsiteFull Time
EdenRoc Sciences
EdenRoc Sciences: Founds and operates a portfolio of life sciences companies.
PhD in bioinformatics/computational biology (or equivalent), experience developing NGS analytical methods, strong Python and cloud (AWS/Linux) skills, expertise in genomics/epigenetics or cancer biology, strong communication.
Python, AWS, Linux, agentic AI
1mo
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Bioinformatics Engineer
San Jose, California, United States
HybridFull Time
AccuScan Sciences
AccuScan Sciences: Develops liquid biopsy and whole-genome sequencing for cancer diagnostics.
3+ YOEBachelor's degree in bioinformatics/computational biology/computer science, 3+ years experience, Nextflow workflow development, Python/Bash scripting, Docker/Kubernetes, AWS experience, testing and documentation skills.
Nextflow, Python, Bash, Docker, Kubernetes, AWS EC2, AWS S3, AWS Batch, AWS Lambda, GitHub, Terraform, CloudFormation
2d
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Bioinformatics Engineer, QDI
Redwood City, California, United States
$130k-$150k/yr OnsiteFull Time
QIAGEN
QIAGENNYSE: QGEN: Provider of sample and assay technologies for molecular diagnostics.
3+ YOEUndergraduate degree in bioinformatics, genetics, molecular biology, or related field; 3+ years of bioinformatics industry experience; production coding with Python and Linux; SQL, graph databases, RDF, OWL, and biomedical ontology experience.
Python, Linux, SQL, AWS Neptune, Neo4j, RDF, OWL
1mo
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Bioinformatics Scientist
Pleasanton, California, United States
$83k-$95k/yr OnsiteFull Time
Thermo Fisher Scientific
Thermo Fisher ScientificNYSE: TMO: Sells equipment and chemicals for scientific research and healthcare.
2+ YOEB.S. in Computer Science, Bioinformatics, or related field with 2+ years experience; proficiency with Linux/Unix and shell scripting; PostgreSQL and R experience preferred; GIT familiarity; strong communication and project management skills; authorized to work in US.
Linux/Unix, R, PostgreSQL, GIT
1mo
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Bioinformatics Programmer
San Francisco, California, United States
$148k-$165k/yr HybridFull Time
University of California, San Francisco
University of California, San Francisco: Public research university dedicated to health sciences and education.
5+ YOEMaster's in bioinformatics (plus 4+ yrs experience) or equivalent; 5+ years with Illumina sequencing and variant analysis; 3+ years with clinical pipelines; proficiency in Python, R, Unix/Linux, shell scripting, statistics, APIs, data migration; strong genomics and cancer biology knowledge.
Python, R, Unix/Linux, Shell scripting, APIs, Illumina, Amazon Web Services (AWS), AWS Batch, LLMs, RAG
3w
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Senior Scientist, Bioinformatics
Monrovia, California, United States
$90k-$120k/yr OnsiteFull Time
ChromoLogic
ChromoLogic: Develops and commercializes disruptive medical, aerospace, and security technologies.
2+ YOEPh.D. in quantitative discipline, minimum 2 years postdoctoral/industry experience, expertise in NGS data analysis, bioinformatics pipelines, Python or R, and machine learning/Bayesian methods.
Python, R, NGS
1w
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Bioinformatics Engineer II
California, United States
$90k-$140k/yr RemoteFull Time
Ambry Genetics
Ambry GeneticsNASDAQ: TEM: Provides clinical genetic testing and hereditary disease screening services.
5+ YOERequires a bachelor's degree and 5 years' experience, master's and 2 years' experience, or PhD in bioinformatics, computer science, or related field; Python, Linux, databases, software engineering, and sequencing knowledge.
Python, Linux, MySQL, PostgreSQL, Microsoft SQL Server, git, FASTQ, BAM, VCF, GTF, AWS, Azure, Google Cloud, Jira, Confluence, BitBucket, Clinvar, HGMD, HGVS, Docker, Bamboo, Jenkins, AWS Code Pipeline
1mo
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Bioinformatics Scientist II
El Monte, California, United States
$110k-$126k/yr OnsiteFull Time
Inform Diagnostics
Inform DiagnosticsNASDAQ: FLGT: Provides specialized pathology and genomic testing services for clinical healthcare.
3+ YOEPh.D. in relevant field, 3+ years related experience, experience with NGS and multi-omics data integration, strong statistics for big data, hands-on bioinformatics tools and programming, teamwork and strong communication.
NGS, LIMS
2mo
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Principal Bioinformatics Software Engineer
Santa Clara, California, United States
$166k-$308k/yr OnsiteFull Time
Roche
RocheSIX Swiss Exchange: ROG: Develops and manufactures pharmaceutical medicines and diagnostic solutions.
5+ YOE5+ years working with NGS data and bioinformatics pipeline verification; degree in computational biology/bioinformatics/biomedical engineering; strong Python, AWS, Linux Shell skills; experience designing and executing verification tests.
Python, AWS, Linux Shell, C++, CI/CD, GPU
2mo
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Senior Scientist, Bioinformatics
San Carlos, California, United States
$109k-$149k/yr OnsiteFull Time
BeOne Medicines
BeOne MedicinesNasdaq: ONC: Develops and sells innovative medicines for treating cancer worldwide.
2+ YOELead bioinformatics for clinical biomarker analysis; oncology/immunology background; strong programming (R/Python); PhD; willing to work in San Carlos, CA; US citizen/green card.
R, Python, Linux, Git, Conda, Snakemake, Nextflow
3mo
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Staff Bioinformatics / Machine Learning Scientist
La Jolla or United States
$154k-$232k/yr OnsiteFull Time
Exact Sciences
Exact SciencesNASDAQ: EXAS: Provides molecular diagnostic tests for early cancer detection.
8+ YOEPhD in relevant field or Master’s with 4+ years, 8+ years bioinformatics, 6+ years in biotech/pharma, strong ML/statistics, NGS/genomics, product/assay experience, collaborative skills.
Python, R, SQL, NGS, Cloud computing, Machine learning, Bioinformatics, Linux
2mo
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Senior Scientist, Bioinformatics
San Diego, California, United States
HybridFull Time
Kenai Therapeutics
Kenai Therapeutics: Developing iPSC-derived neuron replacement therapies for neurological diseases.
3+ YOEPh.D. in bioinformatics, computational biology, genomics, statistics, or related quantitative field with 3–5+ years industry experience; strong statistics and ML foundation; extensive single-cell analysis experience; proficient in Python and R; experience supporting drug discovery; able to use AI/LLM tools; excellent communication; collaborative; a...
Python, R, Scanpy, Seurat, scVI, JavaScript
3w
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Bioinformatics Manager (Oncology Product Development)
San Carlos or United States
$154k-$193k/yr RemoteFull Time
Natera
NateraNASDAQ: NTRA: Provides clinical genetic testing and diagnostics services.
4+ YOE1+ MgmtMaster's or PhD in quantitative field, ≥4 years post-grad bioinformatics/data science experience, ≥1 year technical leadership, experience commercializing algorithmic diagnostic products, Python or R, stats/ML, NGS analysis.
Python, R
2d
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Bioinformatics Specialist
Milpitas, California, United States
$96k-$153k/yr FieldFull Time
BD
BDNYSE: BDX: Manufactures medical devices, surgical instruments, and pharmacy automation systems.
Bachelor's degree in biology, computer science, or related field; NGS and genomics analysis experience; customer-facing experience; strong communication, problem-solving, and teamwork skills.
FASTQ, SAM/BAM, FASTA, Docker, Common Workflow Language (CWL), Seven Bridges, Arvados, AWS
1mo
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Bioinformatics Programmer
San Francisco or United States
HybridFull Time
UCSF Health
UCSF Health: Academic medical center providing advanced patient care and research.
5+ YOE5+ years with Illumina data and variant calling, proficiency in Python, R, Unix/Linux and shell scripting, statistics, APIs, clinical pipeline experience, and genomics/cancer biology knowledge.
Python, R, Unix/Linux OS, shell scripting, APIs, Amazon Web Services (AWS Batch), LLMs, retrieval-augmented generation (RAG)
2mo
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Bioinformatics Engineer, Genomics
San Francisco, California, United States
$120k-$180k/yr OnsiteFull Time
LatchBio
LatchBio: Building cloud-based software and AI for biological data analysis.
5+ YOE5+ years genomics/genetics data; population genomics experience; Python and/or R.
Python, R
1w
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Staff Bioinformatics Scientist
San Diego or United States
$156k-$233k/yr HybridFull Time
Illumina
IlluminaNASDAQ: ILMN: Provides genomic sequencing and array-based solutions for genetic analysis.
6+ YOEExperience in signal processing and data analysis, strong programming (C++ preferred; Java/C# acceptable), Python and Git experience, multi-threading, master's or PhD in a relevant field, minimum 6 years related experience with a master's.
C++, Java, C#, Python, Git
2w
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Bioinformatics Research Associate (3 Month Contract)
Fremont, California, United States
$45-$55/hr OnsiteContract
SeqMatic
SeqMatic: Provides specialized genomic sequencing and bioinformatics research services.
B.S. or M.S. in bioinformatics/computational biology/biostatistics or related; experience with Python/R/Perl/Bash/Java/JavaScript, Linux, NGS data, common tools (Bowtie,GATK,STAR,SAMtools,Cell Ranger), HPC; strong analytical skills.
Python, R, Perl, Bash, Java, JavaScript, Linux, Illumina, 10X Genomics, Bowtie, GATK, Picard, STAR, SAMtools, Cell Ranger, AWS, Microsoft Office