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25 bioinformatics scientist jobs at 19 companies in Berkeley, CA

1w
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Bioinformatics Scientist
Hayward, California, United States
$119k-$149k/yr OnsiteFull Time
Predicine
Predicine: Develops liquid biopsy cancer diagnostics and precision medicine solutions.
3+ YOEMaster's in Biology/Biomedical Engineering/Bioinformatics plus 3 years R&D experience or Doctorate; strong research skills in methylation algorithm development, pipeline validation, NGS data analysis, and statistical QC.
DMFR, next-generation sequencing
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2w
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Bioinformatics Scientist
Pleasanton, California, United States
$83k-$95k/yr OnsiteFull Time
Thermo Fisher Scientific
Thermo Fisher ScientificNYSE: TMO: Sells equipment and chemicals for scientific research and healthcare.
2+ YOEB.S. in Computer Science, Bioinformatics, or related field with 2+ years experience; proficiency with Linux/Unix and shell scripting; PostgreSQL and R experience preferred; GIT familiarity; strong communication and project management skills; authorized to work in US.
Linux/Unix, R, PostgreSQL, GIT
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14h
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Senior Bioinformatics Scientist
San Carlos, California, United States
$131k-$163k/yr OnsiteFull Time
Natera
NateraNASDAQ: NTRA: Provides clinical genetic testing and diagnostics services.
0+ YOEPhD-level bioinformatics expertise, 0–3 years postgrad/professional experience, strong algorithm development, NGS analysis, Python ecosystem, WDL, AWS, Linux, and effective communication skills.
Python, NumPy, Pandas, Scikit-learn, WDL, AWS, Linux, TCGA, COSMIC, OncoKB
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2mo
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Bioinformatics Scientist (Discovery Biology)
South San Francisco, California, United States
OnsiteFull Time
Neurona Therapeutics
Neurona Therapeutics: Develops regenerative cell therapies for chronic neurological disorders.
PhD in a related field or Masters with 3+ years biotech experience; strong single-cell RNA-seq and multiomics; proficient in R/Python; able to work independently in a fast-paced startup.
R, Python, NGS pipelines, single-cell RNA-seq, multiomics, Illumina sequencing
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2mo
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Principal Scientist, Bioinformatics
South San Francisco, California, United States
$180k-$215k/yr HybridFull Time
Nkarta
NkartaNasdaq: NKTX: Develops off-the-shelf natural killer cell therapies for diseases.
5+ YOELead computational analysis of single-cell and spatial omics data; develop scalable pipelines; collaborate cross-functionally to support translational medicine.
Python, R, AWS, single-cell RNA-seq
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1w
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Bioinformatics Scientist/Biostatistician Contractor
Menlo Park, California, United States
$75-$140/hr HybridContract, Full Time
MyOme
MyOme: Provides clinical whole genome analysis for personalized health insights.
3+ YOEMaster's (PhD preferred) in quantitative field, 3+ years analyzing NGS data, coding in R or Python, experience with bcftools/samtools/bedtools/plink, cloud (AWS/GCP), Linux/shell, and genomic databases.
R, Python, bcftools, samtools, bedtools, plink, Nextflow, AWS, GCP, Linux, shell scripting, UCSC, NCBI, dbSNP, Clinvar, Ensembl
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1mo
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Bioinformatics & Data Scientist or Postdoctoral Researcher- Furman lab
Novato, California, United States
$80k-$85k/yr OnsiteFull Time
Buck Institute for Research on Aging
Buck Institute for Research on Aging: Conducts biomedical research to extend the healthy human lifespan.
2+ YOEPhD required in a relevant field, minimum 2 years research experience, strong bioinformatics and computational biology skills, proficiency in R, Python, and Bash, experience with multi-omics data, workflow development, and scientific communication.
R, Python, Bash
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2mo
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Staff/Senior Staff, Bioinformatics Data Scientist
San Francisco, California, United States
$180k-$260k/yr OnsiteFull Time
Rezo Therapeutics
Rezo Therapeutics: Developing a network biology platform for therapeutic drug discovery
8+ YOEPhD in computational biology or related field with 8+ years of industry experience; strong multi-omics expertise; proficient in Python and ML; independent, collaborative, and able to translate biology questions into analyses.
Python, Machine Learning, Data Analysis
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3w
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Scientist II, Field Applications Bioinformatics Support
Menlo Park, California, United States
$112k-$168k/yr HybridFull Time
PacBio
PacBioNASDAQ: PACB: Develops high-fidelity DNA sequencing systems for genomic research.
2+ YOEMSc/PhD in life sciences or bioinformatics,2+ years bioinformatics/support experience,experience with high-throughput sequencing data,pipeline tools,Unix,bash,Python,R,customer-facing support and travel readiness.
SMRT Link, bash, Python, R, WDL, snakemake, nextflow, Salesforce, Unix
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3mo
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Machine Learning Scientist / Senior Machine Learning Scientist
South San Francisco, California, United States
$170k-$233k/yr OnsiteFull Time
Calico
Calico: Researching aging biology to develop longevity-improving therapies.
5+ YOEPhD in computational biology, bioinformatics, computer science, or related field; strong publication record; 0-5 years (Scientist) or 5+ years (Senior Scientist) in industry or academia; deep ML expertise; genomics knowledge; onsite four days/week.
Python, TensorFlow, PyTorch, Genomics data, DNA sequence analysis
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1mo
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Data Scientist
San Francisco, California, United States
HybridFull Time
UCSF Health
UCSF Health: Academic medical center providing advanced patient care and research.
1+ YOEBachelor's in biological/computational field or equivalent, 12+ months working with medical/health data, R or Python fluency, experience with data pipelines, bioinformatics methods, databases, and basic biostatistics.
AWS, Microsoft Azure, Google Cloud, R, Python, Go, Rust, Shell, SQL, WDL, Docker
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2w
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Applications Scientist
Alameda, California, United States
$82k-$103k/yr OnsiteFull Time
Oxford Nanopore Technologies
Oxford Nanopore TechnologiesLondon Stock Exchange: ONT: Develops portable nanopore-based DNA and RNA sequencing devices.
1+ YOEBachelor's in a life science (or Master's),1–3 years industry wet-lab molecular biology experience, strong troubleshooting, communication, and project management; familiarity with NGS and bioinformatics preferred.
Linux, CLI, HPC, Python, R
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1mo
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Data Scientist
San Francisco, California, United States
HybridFull Time
University of California, San Francisco
University of California, San Francisco: Public research university dedicated to health sciences and education.
1+ YOEBachelor's in biological/computational field, 12+ months working with medical or health-related data, experience building ETL/data pipelines, bioinformatics and biostatistics knowledge, proficiency in R or Python, and familiarity with databases, cloud, and containerization.
plink2, Docker, git, R, Python, Go, Rust, shell, SQL, WDL, AWS, Microsoft Azure, Google Cloud
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2mo
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Scientist, Probe Design
Newark, California, United States
$89k-$147k/yr OnsiteFull Time
Bio-Techne
Bio-TechneNASDAQ: TECH: Provides reagents, instruments, and diagnostic tools for life sciences.
4+ YOEPhD with 4+ years in molecular biology, bioinformatics/computational biology; strong Python/R skills; Linux proficiency; probe design experience; RNAscope knowledge; 2+ years Biotech/R&D; travel ~10%.
Python, R, Linux, Perl, C++, Java, BLAST, BLAT
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1mo
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Scientist II, ML - Guided Protein Design Evaluation
Emeryville, California, United States
$147k-$180k/yr HybridFull Time
Profluent
Profluent: Designs functional proteins using deep generative AI models.
5+ YOEPhD (or MS with equivalent industry experience) in molecular biology/related; 5+ years protein engineering and antibody discovery experience; strong NGS screening knowledge; ability to define assay QC and work across ML, bioinformatics, and experimental teams.
Python, pandas, SQL, LIMS
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1mo
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Senior Applied Research Scientist
Santa Clara, California, United States
$168k-$305k/yr OnsiteFull Time
NVIDIA
NVIDIANASDAQ: NVDA: Designs GPU-accelerated computing and artificial intelligence hardware.
2+ YOEPhD (or equivalent) in CS or Computational Biology, 2+ years in deep learning/bioinformatics/structural biology/related fields, strong ML and software engineering skills, experience with model design and evaluation.
Python, C++
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1mo
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Research Scientist, Life Sciences
San Francisco, California, United States
$300k-$320k/yr OnsiteFull Time
Anthropic
Anthropic: Developing safe and reliable artificial intelligence systems.
ML/software engineering in biology; biotech/pharma experience; Python; training/fine-tuning ML models; shipping computational biology tools; independent with collaboration.
Python, Machine Learning, Bioinformatics, Genomics, Protein Language Models, RLHF, Reinforcement Learning, SFT, Data Pipelines, Eval Harnesses, Docker
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3w
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Bioinformaticist Research Scientist (Joint Genome Institute)
Berkeley, California, United States
$110k-$155k/yr OnsiteFull Time, Temporary
Lawrence Berkeley National Laboratory
Lawrence Berkeley National Laboratory: Conducts scientific research to address global challenges.
2+ YOEMinimum 2 years relevant bioinformatics research experience; proficiency in Python; experience with large-scale genomic analysis, scalable workflows, scientific communication, mentoring, and grant writing; commitment to safety and EH&S.
Python, Data Lakehouse
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3w
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Bioinformaticist Research Scientist (Joint Genome Institute)
Berkeley, California, United States
$110k-$155k/yr OnsiteFull Time, Temporary
Lawrence Berkeley National Laboratory
Lawrence Berkeley National Laboratory: Conducts multidisciplinary scientific research for the U.S. Department of Energy.
2+ YOE2+ years relevant bioinformatics research experience beyond highest degree, proficiency in Python, experience with large-scale genomics and scalable workflows, publication record, supervisory experience, grant writing, and strong communication skills.
Python, Data Lakehouse
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3w
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Scientist - Computational Biophysics
Emeryville, California, United States
$100k-$180k/yr OnsiteFull Time
Astera Institute
Astera Institute: Conducts fundamental research in artificial intelligence and longevity science.
PhD in bioinformatics/computational biology/ML, strong protein structure knowledge, experience building large bioinformatic pipelines and managing high-dimensional datasets, proficiency fine-tuning ML models and integrating PLM/LLM/experimental data.
PLM, LLM, ESM, AlphaFold, Transformer
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