42 bioinformatics scientist jobs at 34 companies in California
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Bioinformatics Scientist
Scotts Valley, California, United States
$80k-$130k/yr OnsiteFull Time
PhD in bioinformatics/computational biology (or equivalent), experience developing NGS analytical methods, strong Python and cloud (AWS/Linux) skills, expertise in genomics/epigenetics or cancer biology, strong communication.
Python, AWS, Linux, agentic AI
2w
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Bioinformatics Scientist
Redwood City or Chicago
$100k-$175k/yr OnsiteFull Time
3+ YOEPhD or MS+3yrs in bioinformatics/computational biology or related field; deep NGS expertise; Python/R; cloud (AWS/GCP); Docker; Nextflow/Snakemake; ML/statistical modeling; publication or product contributions.
NGS, Python, R, AWS, GCP, Docker, Nextflow, Snakemake
1mo
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Bioinformatics Scientist
Pleasanton, California, United States
$83k-$95k/yr OnsiteFull Time
2+ YOEB.S. in Computer Science, Bioinformatics, or related field with 2+ years experience; proficiency with Linux/Unix and shell scripting; PostgreSQL and R experience preferred; GIT familiarity; strong communication and project management skills; authorized to work in US.
Linux/Unix, R, PostgreSQL, GIT
4w
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Senior Scientist, Bioinformatics
Monrovia, California, United States
$90k-$120k/yr OnsiteFull Time
2+ YOEPh.D. in quantitative discipline, minimum 2 years postdoctoral/industry experience, expertise in NGS data analysis, bioinformatics pipelines, Python or R, and machine learning/Bayesian methods.
Python, R, NGS
4h
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Sr. Bioinformatics Scientist
San Diego or La Jolla or San Diego or San Diego
$132k-$155k/yr HybridFull Time
PhD in bioinformatics, computational biology, genomics, computer science, or related field, or MS with industry experience; spatial or single-cell genomics experience; Python, Linux, and workflow pipeline proficiency.
Python, Linux, Scanpy, Squidpy, Seurat, Nextflow, Docker, AWS
1mo
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Bioinformatics Scientist II
El Monte, California, United States
$110k-$126k/yr OnsiteFull Time
3+ YOEPh.D. in relevant field, 3+ years related experience, experience with NGS and multi-omics data integration, strong statistics for big data, hands-on bioinformatics tools and programming, teamwork and strong communication.
NGS, LIMS
2mo
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Senior Scientist, Bioinformatics
San Carlos, California, United States
$109k-$149k/yr OnsiteFull Time
2+ YOELead bioinformatics for clinical biomarker analysis; oncology/immunology background; strong programming (R/Python); PhD; willing to work in San Carlos, CA; US citizen/green card.
R, Python, Linux, Git, Conda, Snakemake, Nextflow
2mo
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Senior Scientist, Bioinformatics
San Diego, California, United States
HybridFull Time
3+ YOEPh.D. in bioinformatics, computational biology, genomics, statistics, or related quantitative field with 3–5+ years industry experience; strong statistics and ML foundation; extensive single-cell analysis experience; proficient in Python and R; experience supporting drug discovery; able to use AI/LLM tools; excellent communication; collaborative; a...
Python, R, Scanpy, Seurat, scVI, JavaScript
2d
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Senior Bioinformatics Scientist, Translational Bioinformatics
Hayward, California, United States
OnsiteFull Time
3+ YOEMaster's degree and 3+ years of post-graduation NGS experience required, including liquid biopsy analysis, programming in R or Python, client collaboration, and scientific communication.
R, Python, Unix, Linux, NGS, RNA-seq, machine learning
2w
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Staff Bioinformatics Scientist
San Diego or United States
$156k-$233k/yr HybridFull Time
6+ YOEExperience in signal processing and data analysis, strong programming (C++ preferred; Java/C# acceptable), Python and Git experience, multi-threading, master's or PhD in a relevant field, minimum 6 years related experience with a master's.
C++, Java, C#, Python, Git
3mo
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Staff Bioinformatics / Machine Learning Scientist
La Jolla or United States
$154k-$232k/yr OnsiteFull Time
8+ YOEPhD in relevant field or Master’s with 4+ years, 8+ years bioinformatics, 6+ years in biotech/pharma, strong ML/statistics, NGS/genomics, product/assay experience, collaborative skills.
Python, R, SQL, NGS, Cloud computing, Machine learning, Bioinformatics, Linux
5d
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Principal Bioinformatics Scientist I
Santa Clara, California, United States
$121k-$225k/yr OnsiteFull Time
4+ YOEBachelor's plus 9 years, master's plus 7 years, or Ph.D. plus 4 years of related experience; CAP/CLIA diagnostic validation experience; Python, R, C++, Linux/Bash, Nextflow, and containerization expertise.
Nextflow, Docker, Singularity, Git, Python, R, C++, Linux, Bash
3mo
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Principal Scientist, Bioinformatics
South San Francisco, California, United States
$180k-$215k/yr HybridFull Time
5+ YOELead computational analysis of single-cell and spatial omics data; develop scalable pipelines; collaborate cross-functionally to support translational medicine.
Python, R, AWS, single-cell RNA-seq
4w
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Bioinformatics Scientist/Biostatistician Contractor
Menlo Park, California, United States
$75-$140/hr HybridContract, Full Time
3+ YOEMaster's (PhD preferred) in quantitative field, 3+ years analyzing NGS data, coding in R or Python, experience with bcftools/samtools/bedtools/plink, cloud (AWS/GCP), Linux/shell, and genomic databases.
R, Python, bcftools, samtools, bedtools, plink, Nextflow, AWS, GCP, Linux, shell scripting, UCSC, NCBI, dbSNP, Clinvar, Ensembl
2mo
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Bioinformatics & Data Scientist or Postdoctoral Researcher- Furman lab
Novato, California, United States
$80k-$85k/yr OnsiteFull Time
2+ YOEPhD required in a relevant field, minimum 2 years research experience, strong bioinformatics and computational biology skills, proficiency in R, Python, and Bash, experience with multi-omics data, workflow development, and scientific communication.
R, Python, Bash
2mo
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Staff/Senior Staff, Bioinformatics Data Scientist
San Francisco, California, United States
$180k-$260k/yr OnsiteFull Time
8+ YOEPhD in computational biology or related field with 8+ years of industry experience; strong multi-omics expertise; proficient in Python and ML; independent, collaborative, and able to translate biology questions into analyses.
Python, Machine Learning, Data Analysis
1w
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Senior Scientist, Bioinformatics
San Diego, California, United States
$127k-$166k/yr RemoteFull Time
5+ YOERequires PhD and 5+ years, master's and 6 years, or bachelor's and 8 years of industry experience; NGS analysis, statistics, collaborative coding, cloud, containers, workflows, and programming skills.
Next-generation sequencing (NGS), Whole-genome sequencing (WGS), Whole-exome sequencing (WES), PacBio, Element Biosciences, Git, Python, R, JavaScript, Go, Rust, pytest, unittest, gcloud, AWS, Azure, Docker, Snakemake, Nextflow, CWL, SQL, Seurat, Scanpy, FDA, EMA, GAMP5, FAIR
1w
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Computational Clinical Scientist II, Clinical Bioinformatics
Redwood City, California, United States
$132k-$166k/yr HybridFull Time
2+ YOEM.S. or Ph.D. in bioinformatics, biology, data science, or related field; 2+ years of pharmaceutical or biotech bioinformatics experience; R or Python programming and clinical data analysis expertise.
R, Python, GATK, Salmon, OncoKB, VEP, IDE, version control systems, GDC, TCGA, clusters, containers, cloud computing
1w
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Associate Director of Bioinformatics (Women's Health and Organ Health)
San Carlos, California, United States
$178k-$222k/yr RemoteFull Time
7+ YOE3+ MgmtRequires Ph.D. or equivalent M.S. experience, 7+ years in bioinformatics, 3+ years leading scientists, diagnostic sequencing assay development, NGS analysis, Python, and regulated clinical product experience.
Python, R, Java, AWS, GCP, Snakemake, WDL, Nextflow, Cromwell, Docker, Kubernetes, PacBio HiFi, Oxford Nanopore, Illumina
3mo
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Machine Learning Scientist / Senior Machine Learning Scientist
South San Francisco, California, United States
$170k-$233k/yr OnsiteFull Time
5+ YOEPhD in computational biology, bioinformatics, computer science, or related field; strong publication record; 0-5 years (Scientist) or 5+ years (Senior Scientist) in industry or academia; deep ML expertise; genomics knowledge; onsite four days/week.
Python, TensorFlow, PyTorch, Genomics data, DNA sequence analysis
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