5,270 computational jobs at 1,500 companies in Alameda, CA

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Computational Biologist
Palo Alto, California, United States
OnsiteFull Time
Transcripta Bio
Transcripta Bio: AI-driven drug discovery platform leveraging high-resolution transcriptomic data.
3+ YOEPhD in Bioinformatics/Computational Biology with 3+ years of industry experience; extensive RNA-seq analysis and pipelines.
Python, R, Scanpy, Pandas, NumPy, DESeq2, ggplot2, Snakemake, Nextflow, Git
2mo
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Computational Biologist
Stanford, California, United States
$117k-$150k/yr OnsiteFull Time
Stanford University
Stanford University: Private research university providing academic education and medical services.
3+ YOEPhD preferred in computational biology/bioinformatics/CS or related field; 3+ years postdoctoral or professional experience; proficiency in Python, R, Bash; experience with machine learning, workflow automation, reproducible pipelines, and technical training delivery.
Python, R, Bash
1w
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Staff Computational Biologist
Brisbane or United States
$188k-$270k/yr RemoteFull Time
Freenome
FreenomeNASDAQ: FRNM: Develops blood tests for early cancer detection using machine learning.
8+ YOEPhD and ≥8 years post-PhD experience in computational biology/statistics for cancer or diagnostics; deep molecular biology expertise; experience with high-throughput genomics and modeling.
Python, Numpy, Matplotlib, Pandas, Scikit-learn, TensorFlow, PyTorch, R, C/C++
1mo
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Computational Biologist
New York or San Francisco or United States
$220k-$300k/yr FieldFull Time
Edison Scientific
Edison Scientific: Developing autonomous AI agents for scientific research and discovery.
PhD in biological science or equivalent experience; familiarity with pharma/biotech regulatory landscape; experience analyzing complex biological data types; hands-on experience with LLM/agentic AI in research; strong critical thinking and presentation skills.
LLM, Python, TypeScript, JavaScript
3w
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Scientist - Computational Biophysics
Emeryville, California, United States
$100k-$180k/yr OnsiteFull Time
Astera Institute
Astera Institute: Conducts fundamental research in artificial intelligence and longevity science.
PhD in bioinformatics/computational biology/ML, strong protein structure knowledge, experience building large bioinformatic pipelines and managing high-dimensional datasets, proficiency fine-tuning ML models and integrating PLM/LLM/experimental data.
PLM, LLM, ESM, AlphaFold, Transformer
4d
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Scientist/Sr. Scientist, Computational Chemistry
San Francisco, California, United States
OnsiteFull Time
General Proximity
General Proximity: Develops proximity-based medicines to treat undruggable disease proteins.
3+ YOEPhD-preferred computational chemist with 3+ years in pharma/biotech, hands-on SBDD and ligand-based design, experience with cheminformatics, AI/ML molecular design, Python and RDKit, and cross-functional collaboration.
Schrödinger, MOE, CCDC tools, ChemAxon, KNIME, Pipeline Pilot, RDKit, DataWarrior, Spotfire, AlphaFold, Python
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Computational Scientist, Lung Transplant Immunology
San Francisco, California, United States
$64k-$195k/yr OnsiteFull Time
University of California
University of California: A public research university system providing education and healthcare.
5+ YOEAdvanced computational/statistical skills for end-to-end analysis of multimodal genomic datasets; strong R and Python proficiency; experience with reproducible workflows, HPC/cloud environments, and publication record in high-dimensional modalities.
R, Bioconductor, Seurat, Python, scanpy, anndata, scikit-learn, pandas, Linux, SLURM, Git, GitHub, conda, mamba, renv, Nextflow, Snakemake, Microsoft Visual Studio, AWS, GCP, UCSF Wynton, AWS HealthOmics
1d
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Neuroscience PhD (Computational / Active Inference)
San Francisco or London
$150k/yr OnsiteFull Time
Clera
Clera: AI talent agent matching professionals with high-growth startup roles
PhD required in computational neuroscience or related field; experience building and deploying inference models from wearable sensor data; strong ML engineering skills and active inference expertise; able to work onsite in San Francisco or London without new visa sponsorship.
Python, active inference frameworks
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Computational Linguist, AI Evaluation
San Francisco, California, United States
$140k-$160k/yr HybridFull Time
Twelve Labs
Twelve Labs: AI foundation models for video search and human-like understanding.
5+ YOE5+ years in AI data operations; experience designing model evaluation pipelines, large-scale data collection/labeling, Python automation, strong communication and project management skills.
Python, FFMPEG, AWS (S3, EC2), Linear, Notion, Google Suite, Encord
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Senior Computational Chemistry Engineer
Fremont, California, United States
$119k-$261k/yr HybridFull Time
Lam Research
Lam ResearchNASDAQ: LRCX: Designs and manufactures wafer fabrication equipment for the semiconductor industry.
3+ YOEPhD in computational chemistry/chemistry/chemical engineering/materials,3+ years industry experience post-PhD, DFT and quantum chemistry experience (e.g. Gaussian), atomistic modeling, and strong collaboration and communication skills.
DFT, Gaussian, ReaxFF, MACE, SevenNet
5d
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Scientist, Computational Biology
Menlo Park, California, United States
$130k-$150k/yr HybridFull Time
MyOme
MyOme: Provides clinical whole genome analysis for personalized health insights.
Ph.D. or Master's in quantitative biosciences with relevant experience; hands-on biobank and multi-omic analysis; proficiency in Python/R, version control, cloud biobank environments; strong statistical and epidemiological skills.
Python, R, Git, DNAnexus, Terra, AWS, GCP
1w
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Computational Chemist (Machine Learning) I / II
Berkeley, California, United States
$165k-$180k/yr OnsiteFull Time
Aralez Bio
Aralez Bio: Produces noncanonical amino acids for drug development through biocatalysis.
2+ YOEPh.D. or Master’s in computational chemistry/chemoinformatics,2+ years post-grad experience,expertise in ML for molecular property prediction,chemoinformatics (RDKit),Python,data pipelines,SQL,strong communication with lab scientists.
RDKit, REINVENT, Python, numpy, pandas, scipy, SQL
2w
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Computational Chemist - Generative Molecule & Protein Design
Santa Clara, California, United States
$145k-$270k/yr OnsiteFull Time
Roche
RocheSIX Swiss Exchange: ROG: Develops and manufactures pharmaceutical medicines and diagnostic solutions.
1+ YOEPhD or Master's+2yrs (or Bachelor's+3yrs) in computational chemistry/related,1+ years research in protein modeling/molecular design, experience with docking, MD and quantum tools, Python and RDKit, and generative ML for molecules.
GROMACS, AMBER, OpenMM, Python, NumPy, SciPy, Pandas, PyTorch, RDKit, Transformers, GNNs, diffusion models, Computer-Aided Synthesis Planning (CASP)
1mo
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Beyond Moore Computational Research Scientist
Berkeley or California
$95k-$227k/yr HybridFull Time, Temporary
Lawrence Berkeley National Laboratory
Lawrence Berkeley National Laboratory: Conducts scientific research to address global challenges.
3+ YOEPhD in computing discipline, minimum 3 years postdoctoral or equivalent research experience, expertise in processor/accelerator design, SPICE/Verilog, CAD/EDA tools, C++/Python, FPGA flows, and record of publications.
Spice, Verilog, C++, Python, Perl, UNIX shell scripts, make, configure, CHISEL, PyMTL, FPGA, CAD, EDA, ASIC
1mo
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Senior Scientist, Computational Biology
South San Francisco or Seattle or London
$136k-$170k/yr OnsiteFull Time
Xaira Therapeutics
Xaira Therapeutics: Develops AI models for protein and antibody drug discovery.
5+ YOEPhD in a quantitative biology field, 5+ years industry/applied research, deep single-cell RNA‑seq and Perturb‑seq expertise, experience integrating large-scale datasets, production workflow development (Nextflow), Docker, AWS, Python (numpy, pandas, scanpy, scikit-learn), Unix, and GitHub.
Nextflow, Docker, AWS, Python, numpy, pandas, scanpy, scikit-learn, Unix, GitHub
2w
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Senior Computational Chemistry Engineer
Fremont, California, United States
$119k-$261k/yr HybridFull Time
Lam Research
Lam ResearchNASDAQ: LRCX: Manufacturing equipment used to fabricate advanced semiconductor microchips.
3+ YOEPh.D. in related field, 3+ years post-Ph.D. industry experience, experience with DFT/Gaussian, quantum chemistry and reaction pathway analysis, strong collaboration and communication skills.
Gaussian, Density Functional Theory (DFT), ReaxFF, MACE, SevenNet
2w
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Staff Computational Scientist, Grid Optimization, Tapestry
Mountain View, California, United States
$207k-$300k/yr HybridFull Time
Alphabet
AlphabetNASDAQ: GOOGL: Holding providing internet, software, and AI services.
6+ YOEMaster's or PhD in STEM, 6+ years in modeling and optimization, strong power systems knowledge, numerical methods and solver experience, ability to produce production-ready code, collaborative across disciplines.
Python, Java, C/C++, JAX, Julia, AWS, GCP, Azure
4d
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Member of Technical Staff - Applied Computational Biologist
New York City or San Francisco
OnsiteFull Time
Valthos
Valthos: Develops AI systems to identify biological threats and design countermeasures.
Extensive computational biology research experience, strong scientific communication, ability to analyze biological data, proficiency in Python, and ability to work on-site in New York City or San Francisco.
Python
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Computational Materials Scientist - Postdoctoral Researcher
Livermore, California, United States
$123k/yr OnsiteFull Time
Lawrence Livermore National Laboratory
Lawrence Livermore National Laboratory: Develops science and technology for United States national security.
PhD in materials-related field, ability to obtain DOE Q-level clearance (U.S. citizenship required), expertise in CALPHAD, ICME, uncertainty quantification, and scientific software development; experience with thermodynamic tools and strong publication record.
Thermo-Calc, Pandat, FactSage, PyCalphad, Thermochimica, OpenCalphad, High Performance Computing, Materials Acceleration Platform
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AI/ML Computational Science Specialist
Mountain View or Milwaukee or Dallas or Columbus or Kirkland or Cincinnati or New York or Cleveland or Oklahoma City or Austin or Albany or Chicago or St. Petersburg or Hartford or Pittsburgh or St. Louis or Miami or Sacramento or Raleigh or Minneapolis or Scottsdale or San Francisco or Morristown or Denver or Boston or Philadelphia or Des Moines or Overland Park or Los Angeles or Charlotte or Walnut Creek or Carmel or Seattle or Houston or Arlington or Atlanta or Redmond or Bentonville or Beaverton or Nashville or Detroit or San Diego
$59k-$206k/yr HybridFull Time
Accenture
AccentureNYSE: ACN: Global provider of management consulting and technology services.
3+ YOE3+ years in data analysis/statistics/CS, 2+ years in ML/DL/NLP, 2+ years with cloud AI/ML services, 1+ year building conversational AI; Bachelor's degree or equivalent required.