92 computer scientist jobs at 46 companies in Boston, MA
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Computer Scientist – Systems Security Research
Lexington, Massachusetts, United States
$140k-$200k/yr OnsiteFull Time
3+ YOEThesis-based M.S. with 3+ years or Ph.D. in CS/CE/EE/cybersecurity or equivalent research experience; strong systems programming (C/C++, Rust, Python, Assembly); systems research experience; eligibility for Top Secret clearance.
Linux, RTOSs, Xen, QEMU, LLVM, C, C++, Rust, Python, Assembly, seL4, AFL++
1mo
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Senior Scientist, Computer Vision & Robotics
Cambridge, Massachusetts, United States
$170k-$220k/yr HybridFull Time
5+ YOEB.S. in CS/Engineering or related; 5+ years in computer vision, ML, and image processing; proficiency in Python and C++; experience with robotics, proposal generation, and interacting with customers; US citizenship and ability to obtain clearance.
PyTorch, TensorFlow, Keras, Python, C++, Docker, Kubernetes, Helm, OpenCV, CUDA, EO/IR, sonar, radar, lidar, acoustic, LDV
3d
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Consultant Scientist, Computer Aided Drug Design (CADD)
Watertown, Massachusetts, United States
$150k-$185k/yr HybridContract
5+ YOEPhD required; 5+ years CADD/pharma experience; expertise in physics-based and AI/ML computational approaches; proficiency in scientific programming and molecular simulation; strong communication and collaboration skills.
Python, R, C++, AMBER, OpenMM, NAMD, Gromacs, scikit-learn, PyTorch
2d
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Scientist, Computational Sensing
Cambridge, Massachusetts, United States
$115k-$165k/yr OnsiteFull Time
3+ YOEMaster's degree plus 3+ years of relevant industry experience or PhD in a quantitative discipline; Python, scientific computing, complex dataset analysis, and expertise in statistics, machine learning, signal processing, or Bayesian modeling.
Python
1d
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Scientist, Data Science
Waltham or Cambridge
$91k-$137k/yr OnsiteFull Time
2+ YOERequires advanced training in bioinformatics, computational biology, data science, epidemiology, or a related field; biological dataset analysis, Python or R, statistics, machine learning, and NGS experience.
Python, R, machine learning, RNA-seq, DNA methylation, ChIP-seq, ATAC-seq, random forest, gradient boosting, transformers, GTEx, TCGA, TOPMed, UK Biobank, FinnGen, Mendelian randomization, DINO, UNI, CONCH, GitHub
3w
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Proteomics Scientist
Boston, Massachusetts, United States
OnsiteFull Time
Proxima: Uses AI to design proximity-based medicines for undruggable proteins.
Experience in mass‑spec sample prep and proteomics workflows, ability to operate/maintain LC/MS (Thermo Fisher Neo Vanquish, Orbitrap/Astral), collaborate with computational teams, and document scientific data.
LC/MS, Thermo Fisher Neo Vanquish LC, Orbitrap, Astral
4d
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Scientist II/Senior Scientist, Computational Biophysics
Cambridge or London or San Francisco
$141k-$218k/yr OnsiteFull Time
PhD or equivalent experience in computational biophysics/chemistry, deep hands-on MD and free-energy expertise, experience with OpenMM/OpenFE, ability to define and validate biophysics workflows for drug discovery.
OpenMM, OpenFE, LLM
4d
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Principal Scientist, TCR Optimization
Cambridge, Massachusetts, United States
$143k-$257k/yr HybridFull Time
5+ YOEPhD and ≥5 years post-PhD experience in TCR/protein engineering, directed evolution, display screening, biophysical and functional assays; ability to lead optimization campaigns and collaborate with computational teams.
NGS, AI/ML
3mo
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Computational Scientist, Protein Engineering
Boston, Massachusetts, United States
$118k-$138k/yr OnsiteFull Time
4+ YOEPhD and/or 4+ years in computational biology, bioinformatics, protein engineering, or related field; strong Python, data pipelines, Unix, and antibody engineering experience; experience with MPRA/NGS data; collaboration skills.
Python, Unix, Git, NGS data analysis
3w
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Computational Scientist I - Scalable Services
Burlington, Massachusetts, United States
$88k-$124k/yr OnsiteFull Time
0+ YOEPhD required in computer science, mathematics, bioinformatics, physics or related; strong computational and data analysis skills; excellent communication; experience developing software; 0+ years experience.
1mo
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Computational Pathology Scientist
Providence, Rhode Island, United States
OnsiteFull Time, Temporary
2+ YOEMaster's in computer/data science or related, 2+ years related experience, 1-2 years AI-based image analysis, strong Python and ML/DL experience, HPC/cloud experience, familiarity with foundation models and privacy-compliant deployments.
Python
1mo
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Data Scientist Senior
Archbald or Camden or Chelmsford or Goleta or Grand Prairie or Lufkin or Ocala or Orlando or Troy
$105k-$185k/yr HybridFull Time
Bachelor's in Engineering/Computer Science/AI or related; experience with structured and unstructured data, SQL and Python proficiency, familiarity with SAP HANA/EDW, ability to develop prototypes to production; U.S. citizenship and ability to obtain Secret clearance.
SQL, Python, EDW, SAP HANA, SAP, Apriso, Tableau, Keras, TensorFlow, Gensim, CUDA, scikit-learn, SciPy, PyTorch
1mo
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Principal Research Scientist
Bedford, New Hampshire, United States
$176k-$282k/yr OnsiteFull Time
10+ YOEPhD in Computer Science or related + 10+ years experience, strong cybersecurity/AI research background, hands-on ML (transformers, PyTorch, TensorFlow), proposal writing and customer engagement, US citizenship with Top Secret/SCI eligibility.
PyTorch, TensorFlow, transformers
1mo
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Research Scientist, Quantum Chemistry
Cambridge or London
OnsiteFull Time
PhD in computational/theoretical chemistry with catalytic focus, first-author publications, production quantum-chemistry package fluency, DFT and kinetics expertise, Python and computational-chemistry stack experience.
Gaussian, ORCA, Python, ASE, cclib, RDKit, DLPNO-CCSD(T), CASPT2
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Principal Research Scientist
Bedford, New Hampshire, United States
$176k-$282k/yr OnsiteFull Time
10+ YOEPhD in Computer Science (or related) with 10+ years experience, strong research and development background in cybersecurity/systems, hands-on AI experience (transformers, PyTorch, TensorFlow), proposal and DARPA leadership experience, US citizen able to obtain Top Secret/SCI.
PyTorch, TensorFlow, Transformers
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R&D Group Lead Scientist
Cambridge, Massachusetts, United States
OnsiteFull Time
5+ YOEAdvanced degree (MS or PhD) in materials science, metallurgy, or related engineering field; 5+ years industry experience; experience in metallurgical processing, alloy design, computational design tools, characterization techniques, and leadership/mentorship.
1mo
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Pathology Computational Scientist
Boston, Massachusetts, United States
$94k-$137k/yr OnsiteFull Time
Mass General Brigham: Provides integrated medical care, research, and clinical training services.
Experience in microbiome bioinformatics and machine learning, advanced deep learning skills, Python and PyTorch experience preferred, Git and SLURM familiarity, ability to manage large biomedical datasets and contribute to publications/grants.
Python, PyTorch, Git, SLURM
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Research Scientist, Robotics, DeepMind
Cambridge, Massachusetts, United States
$147k-$210k/yr OnsiteFull Time
PhD in computer science or equivalent, publication record, experience with simulators and robots, training large models, robot manipulation, and Python programming.
Python, Gemini, Gemini Robotics, Gemini Robotics On-Device, transformers
1mo
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Data Scientist Contractor, Computational Biology
Cambridge, Massachusetts, United States
OnsiteContract
3+ YOEPhD in bioinformatics/computational biology/systems biology, 3+ years industry or postdoc experience; strong RNA-seq, scRNA-seq, and long-read sequencing (Nanopore/PacBio) analysis; Python/R, Linux, HPC/AWS proficiency; reproducible research skills.
Python, R, Linux, AWS, Nanopore, PacBio, High-performance computing clusters, RAPTM Platform
1w
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Senior Scientist, Antibody Repertoire Sequencing & Discovery
Worcester, Massachusetts, United States
$110k-$209k/yr OnsiteFull Time
Expertise in antibody repertoire sequencing and immunoglobulin genetics; proficiency with NGS platforms, molecular biology techniques, and antibody/DNA analysis software; experience applying computational/AI methods to antibody discovery.
PipeBio, Geneious, Sequencher, Microsoft Excel, Microsoft PowerPoint, Microsoft Word, Illumina NextSeq, Illumina MiSeq, PacBio
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