39 deep learning scientist jobs at 28 companies in Holden, MA
3d
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Senior Machine Learning Scientist
Seattle or Boston or Scottsdale or Vietnam or Europe
$160k-$256k/yr HybridFull Time
8+ YOEPhD in computer science or related field, 8+ years of experience for the senior level, expertise in LLMs, computer vision, GenAI, Python, C/C++, deep learning frameworks, and robotics systems.
Python, C, C++, TensorFlow, PyTorch, Keras, ROS
2mo
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Principal Machine Learning Scientist
Cambridge, Massachusetts, United States
$124k-$186k/yr OnsiteFull Time
Ph.D. in a relevant computational/engineering life-science field, deep expertise in ML for biomolecules, strong Python programming, experience with large biochemical/structural datasets, excellent communication and scientific rigor.
Python, Molecular Dynamics, Rosetta, random forests, deep learning, neural networks
2mo
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Machine Learning Scientist – Clinical Prediction
Boston or San Diego or United States
$148k-$186k/yr HybridFull Time
3+ YOEMS in chemistry/bio/chemical engineering or PhD/equivalent; 3+ years relevant experience; strong Python and deep-learning fine-tuning skills; clinical dataset experience; data science and engineering best practices; familiarity with Docker, CUDA, Kubernetes, and Weights & Biases.
Python, Docker, CUDA, Kubernetes, Weights & Biases, HPC
2mo
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Principal Machine Learning Scientist
Cambridge, Massachusetts, United States
$124k-$186k/yr OnsiteFull Time
5+ YOEPhD in Computational Chemistry/Biology or related field; deep ML for biomolecules; large datasets; Python; strong communication.
Python, Deep Learning, Molecular Dynamics, Rosetta, NLP, Neural Networks
2mo
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Senior Research Scientist, Machine Learning (BioFM)
Toronto or Cambridge
$175k-$200k/yr HybridFull Time
PhD (or equivalent) in a quantitative field, deep expertise in deep learning and foundation models for biological sequences, track record building large-scale models (PyTorch), experience with massive -omics datasets, strong communication and mentorship skills.
PyTorch, GCP
2w
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Principal Scientist, Machine Learning
Cambridge, Massachusetts, United States
$208k-$286k/yr OnsiteFull Time
5+ YOEMaster’s or PhD and 5+ years in scientific, engineering, or computational work; expertise in Python, ML frameworks, version control, databases, deep learning, and AI/ML project leadership.
Python, PyTorch, JAX, TensorFlow, Pydantic AI, LangGraph, LangChain, CrewAI, AutoGen, Anthropic, OpenAI, Vertex AI, Amazon Bedrock, MLOps
1mo
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Applied Scientist, AI & Deep Learning (mid to senior level)
Cambridge, Massachusetts, United States
$120k-$220k/yr HybridFull Time
3+ YOEU.S. citizen able to obtain security clearance, Bachelors in CS or related field required, 3+ years building ML/AI systems (or graduate degree), Python and Linux proficiency, strong math and communication skills.
Python, Linux
2w
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Scientist II / Senior ML Scientist, Cofolding and Structure-Aware ML
Cambridge or London or San Francisco
$228k-$358k/yr OnsiteFull Time
PhD or equivalent experience in ML/computational biology/chemistry; hands-on deep learning for molecular and protein structure; experience with contrastive/self-supervised methods and DEL or related datasets; practical PyTorch or JAX experience.
PyTorch, JAX, AlphaFold
2mo
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Visiting Scientist
Boston, Massachusetts, United States
$155k-$185k/yr OnsiteFull Time
PhD required; strong background in machine learning/deep learning and MRI; experience with Python and modern ML frameworks; track record of peer‑reviewed publications and working with large imaging datasets.
Python, PyTorch, TensorFlow, H200s GPUs, HPC
2mo
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Pathology Computational Scientist
Boston, Massachusetts, United States
$94k-$137k/yr OnsiteFull Time
Mass General Brigham: Provides integrated medical care, research, and clinical training services.
Experience in microbiome bioinformatics and machine learning, advanced deep learning skills, Python and PyTorch experience preferred, Git and SLURM familiarity, ability to manage large biomedical datasets and contribute to publications/grants.
Python, PyTorch, Git, SLURM
2w
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Senior Applied Scientist
North Reading, Massachusetts, United States
$167k-$226k/yr OnsiteFull Time
3+ YOERequires 3+ years building machine learning models, PhD or master's degree plus 6+ years applied research, programming, deep learning, control, simulation, and real-time controller experience.
Java, C++, Python, IsaacLab, MuJoCo, Drake, R, scikit-learn, Apache Spark, MXNet, TensorFlow, NumPy, SciPy, Hadoop, MATLAB, ROS
3mo
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Staff, ML Research Scientist
Waltham, Massachusetts, United States
$154k-$193k/yr OnsiteFull Time
5+ YOE5+ years in deep learning for computer vision or LLMs; Transformers, VLMs/VLAs, and Deep Reinforcement Learning; data management, training, deployment; strong communication; collaborative work.
Python, TensorFlow, PyTorch, Transformers, DL frameworks, Computer Vision, Reinforcement Learning
1mo
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Data Scientist II
San Francisco or Ottawa or Phoenix or Toronto or Los Angeles or Denver or Salt Lake City or Atlanta or Chicago or Houston or Portland or New York City or Vancouver or San Diego or Washington, D.C. or Sacramento or Jacksonville or Seattle or Mexico City or Austin or Miami or Boston or Dallas
$97k-$184k/yr HybridFull Time
3+ YOE3+ years building and deploying ML models at scale, proficiency in Python, SQL/PySpark, Spark/Databricks, experience with NLP, deep learning and generative models, BS/MS in quantitative field.
Scikit-learn, NumPy, PyTorch, Python, SQL, Apache Spark, Databricks, PySpark
2w
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Senior Data Scientist
Boston, Massachusetts, United States
$135k-$165k/yr RemoteFull Time
1+ YOEAdvanced experience building and shipping predictive models using deep learning and traditional methods; strong Python, PyTorch/TensorFlow, SQL, cloud and MLOps skills; BS/MS/PhD in related field with 1–5 years' experience.
PyTorch, TensorFlow, Python, Jupyter, Pandas, NumPy, Scikit-learn, LightGBM, XGBoost, Transformers, SQL, AWS, Azure, Google Cloud, Databricks, Docker, CI/CD
5d
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Research Scientist, Molecular AI
Boston or Cambridge
$116k-$182k/yr OnsiteFull Time
Ph.D. in a related computational field; deep learning experience for molecular modeling; Python, PyTorch and/or JAX; structure prediction or co-folding experience; rigorous experimentation and collaboration skills.
Python, PyTorch, JAX, AlphaFold2, AlphaFold3, RoseTTAFold, Chai-1, Boltz, NeurIPS, ICML, ICLR, GCP, AWS, Azure, GPU, HPC, Claude Code, Codex
3mo
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Staff Data Scientist
North Bethesda or Waltham
$163k-$190k/yr HybridFull Time
8+ YOE8+ years in data science/ML; advanced degree options; expert Python/SQL; expertise in geometric deep learning and 3D geometry; experience managing strategic external partnerships.
Python, SQL, Geometric Deep Learning, Computer Vision, 3D mesh processing
1mo
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Data Scientist, Baseball Analytics
Boston, Massachusetts, United States
$75k-$100k/yr OnsiteFull Time
Experience in predictive modeling and machine learning, strong analytical skills, deep baseball knowledge, proficiency with SQL and R or Python, ability to communicate technical findings to non-technical audiences. Advanced degree preferred.
SQL, R, Python
1mo
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Senior Data Scientist (Remote)
Westborough, Massachusetts, United States
$120k-$170k/yr RemoteFull Time
5+ YOEMaster's in a quantitative field, 5+ years data science (≥3 years industry), strong Python and production software skills, ML/deep learning expertise, experience with Polars, Pandas, NumPy, scikit-learn, SQL, TensorFlow/PyTorch, cloud platforms, Git, and Jira. Must be authorized to work in the U.S.
Python, Polars, Pandas, NumPy, scikit-learn, SQL, TensorFlow, PyTorch, AWS, Azure, GCP, Databricks, Snowflake, Linux, Git, Jira
1d
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Senior Research Scientist (m/f/d)
Boston, Massachusetts, United States
OnsiteFull Time
PhD or master's in computer science, machine learning, robotics, or related field; significant research publications; leading AI research experience; deep learning, computer vision, PyTorch or JAX expertise.
PyTorch, JAX, Transformers, Diffusion Models, Large Language Models (LLMs), NeurIPS, CVPR, ICCV, ICRA, IROS, CoRL
1mo
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Scientist, Translational Pathology, Oncology
Cambridge, Massachusetts, United States
$92k-$138k/yr OnsiteFull Time
3+ YOEBachelor's degree and 3 years relevant experience; expertise in laboratory automation, Python pipeline development, deep learning for image analysis, data integration and visualization, and GxP-aware reproducible practices.
Python, R, Git, Flask, Streamlit, QuPath, HALO, Visiopharm
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