San Francisco • 50 milesRemote · Hybrid · Onsite · Field · All Environments
San Francisco • 50 milesRemote · Hybrid · Onsite · Field · All Environments
San Francisco • 50 milesRemote · Hybrid · Onsite · Field · All Environments
San Francisco • 50 milesRemote · Hybrid · Onsite · Field · All Environments
139 deep learning scientist jobs at 46 companies in San Francisco, CA
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Senior Deep Learning Scientist, Multimodal Agentic RL
Santa Clara or United States
$184k-$288k/yr HybridFull Time
8+ YOEMaster's or PhD in CS/AI/Applied Math with 8+ years experience, strong Python and PyTorch skills, deep learning and RL expertise, multimodal research and model lifecycle experience.
Python, PyTorch, Nemotron
3mo
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Machine Learning Scientist / Senior Machine Learning Scientist
South San Francisco, California, United States
$170k-$233k/yr OnsiteFull Time
5+ YOEPhD in computational biology, bioinformatics, computer science, or related field; strong publication record; 0-5 years (Scientist) or 5+ years (Senior Scientist) in industry or academia; deep ML expertise; genomics knowledge; onsite four days/week.
Python, TensorFlow, PyTorch, Genomics data, DNA sequence analysis
3mo
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Lead Data Scientist-Deep Learning Specialist
Pleasanton, California, United States
OnsiteFull Time
Lead deep learning and data science efforts, develop models, and provide technical leadership; specific responsibilities and qualifications provided by hiring team.
3w
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Machine Learning Scientist
San Francisco, California, United States
$180k-$270k/yr OnsiteFull Time
PhD or equivalent experience in ML/computational neuroscience, expertise in deep learning, proficiency in PyTorch/TensorFlow and Python, experience deploying models, strong communication and collaboration skills.
PyTorch, TensorFlow, Python
1mo
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Staff Machine Learning Scientist
Brisbane, California, United States
$200k-$284k/yr HybridFull Time
6+ YOEPhD in quantitative field with 6+ years post-PhD industry/postdoc experience in applied ML/DL; demonstrated publications or impact; proficiency in Python/R/C/C++/Java; experience with deep learning, supervised/self-supervised/contrastive learning.
Python, R, Java, C, C++, PyTorch, TensorFlow, JAX, Hugging Face, TensorBoard, MLflow, Weights & Biases, Docker, GCP, Microsoft Azure, AWS
3mo
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Senior Machine Learning Scientist, Advertising
Austin or San Jose
$149k-$361k/yr HybridFull Time
8+ YOEPhD in a quantitative field; 8+ years of applied research using statistical and deep learning; published work in advertising; strong communication and collaboration.
3w
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Senior Machine Learning Scientist, AI for Biology & Translation (AIBT)
South San Francisco, California, United States
$148k-$274k/yr OnsiteFull Time
Ph.D. in a quantitative discipline, deep expertise in deep learning and foundation models, experience deploying large-scale AI, strong programming and collaboration skills.
Python, PyTorch, JAX, TensorFlow, Hugging Face
2mo
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Machine Learning Scientist - Quantum Chemistry
Welwyn or Basel or San Francisco
OnsiteFull Time
PhD or equivalent in a quantitative field; deep ML expertise; hands-on quantum chemistry experience (Psi4, PySCF, ORCA, xTB); fluent in Python and PyTorch or JAX; publication record; experience building scalable ML pipelines and synthetic datasets.
Psi4, PySCF, ORCA, xTB, Python, PyTorch, JAX, GitHub, GitLab
2w
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Principal Machine Learning Scientist - Search and Recommendations
Seattle or San Jose
$224k-$387k/yr OnsiteFull Time
10+ YOEPhD/MS or equivalent,10+ years industry experience building production search/recommendation systems; expertise in deep learning, retrieval, personalization, causal inference; proficiency in Python and ML frameworks; strong experimentation and leadership skills.
Python, TensorFlow, JAX, PyTorch, Spark, Hadoop, AWS, GCP, Microsoft Azure, A/B testing
3mo
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Machine Learning Scientist 5 - Ads Bidding
United States or Los Angeles or Los Gatos
$466k-$750k/yr RemoteFull Time
Advanced degree in a quantitative field, proficiency in Python/Scala/Java, deep ML and optimization knowledge, experience deploying algorithms on large-scale production data, and experience building bidding algorithms.
Python, Scala, Java
1mo
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Applied Scientist / Machine Learning Engineer
Sunnyvale, California, United States
$312k-$370k/yr HybridFull Time
2+ YOEMasters (with ~6+ years) or PhD (with 2+ years) in CS/ML/robotics/math; strong ML and software fundamentals; production ML experience; fluency in Python and a deep-learning framework (PyTorch); experience with large-scale data and foundation-model workflows.
Python, PyTorch, turbopuffer, Milvus, Ray Data, Daft, Spark, Lance, Iceberg
1mo
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Research Scientist - Machine Learning
San Francisco, California, United States
$150k-$250k/yr OnsiteFull Time
Expertise in scientific Python and a deep learning framework, strong probability and linear algebra, publications in top ML venues, experience with training/deploying high-performance models and related infrastructure.
Python, C++, PyTorch, JAX, TensorFlow, Keras, Slurm, Ray, Weights & Biases, AWS, ONNX
1mo
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Senior Research Scientist - Machine Learning System
San Jose, California, United States
OnsiteFull Time
Bachelor's degree in CS/EE or related, proficiency in C/C++, Python, algorithms and data structures, understanding of deep learning and PyTorch, GPU/CUDA optimization experience preferred.
C, C++, Python, PyTorch, CUDA, TensorRT-LLM, ORCA, VLLM, RDMA, GPU, NPU
1mo
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(General Hire) Machine Learning Scientist Graduate (TikTok Recommendation) - 2026 Start (PhD)
San Jose, California, United States
$156k-$317k/yr OnsiteFull Time
PhD in CS/ML (completed or near completion), strong research background, deep learning framework experience (PyTorch, TensorFlow), proficiency in C/C++, Python and shell, strong publications preferred.
PyTorch, TensorFlow, C, C++, Python, Shell
1mo
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ML Research Scientist (MLRS) - Representation Learning for Molecular AI
San Francisco or New York City
$165k-$259k/yr HybridFull Time
Industry post-degree ML research experience, proficiency in Python and modern ML frameworks (PyTorch, JAX), experience with 3D geometric deep learning and large-scale ML experiments, strong communication and research impact (publications or talks).
Python, PyTorch, JAX, NequIP, MACE, SchNet, PaiNN
1w
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Staff, Data Scientist (Pricing/Reinforcement Learning)
Bentonville or Sunnyvale
$110k-$220k/yr OnsiteFull Time
8+ YOERequires 8+ years in data science/applied ML or stated degree-and-experience alternatives, production optimization experience, Python, deep learning, causal modeling, and pricing or elasticity expertise.
Python, PyTorch, TensorFlow, Microsoft Azure, Spark, GCP, Scala, R, scikit learn, torch, MLOps, CI/CD, GNNs, PPO, DQN, Double ML, Instrumental Variables, Uplift modeling, Bayesian, conformal prediction, A/B testing, Feature Stores, LLM-based agents, Web Content Accessibility Guidelines (WCAG)
1mo
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Research Scientist, Gen AI & User Representation Learning
Palo Alto, California, United States
$100k-$130k/yr RemoteFull Time
5+ YOEPhD (or near completion) in CS/ML or equivalent experience; strong background in deep learning, representation learning, transformers, generative models; experience with PyTorch/Python and large-scale GPU training; 5+ years preferred.
Python, PyTorch, JAX, CUDA, PyTorch Distributed, NVIDIA GPU
2w
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Scientist II / Senior ML Scientist, Cofolding and Structure-Aware ML
Cambridge or London or San Francisco
$228k-$358k/yr OnsiteFull Time
PhD or equivalent experience in ML/computational biology/chemistry; hands-on deep learning for molecular and protein structure; experience with contrastive/self-supervised methods and DEL or related datasets; practical PyTorch or JAX experience.
PyTorch, JAX, AlphaFold
1mo
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(USA) Staff, Data Scientist
Sunnyvale, California, United States
$143k-$286k/yr OnsiteFull Time
5+ YOESenior data scientist with expertise in ML (deep learning, RL, NLP), distributed computing (Spark/Hadoop), Python, big-data platforms, SQL, cloud (GCP/Azure), model deployment in high-scale production, and strong leadership.
Spark, Python, Java, C, C++, Hadoop, Hive, Pig, MapReduce, Scala, Git, SQL, GCP, Azure, scikit-learn, TensorFlow, PyTorch, R
2mo
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ML Research Scientist (Embodied AI & Reinforcement Learning)
Palo Alto, California, United States
$175k-$250k/yr OnsiteFull Time
PhD or equivalent research experience in ML/robotics/CS/neuroscience, strong publication/technical track record in RL/embodied AI, deep learning and large-scale training expertise, proficiency in Python, simulation and policy evaluation experience.
Python
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