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23 lims engineer jobs at 14 companies in Santa Rosa, CA

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Lead Automation Engineer, MES & Digital Systems - Project Farma
Alabama or California or Colorado or District of Columbia or Illinois or Indiana or Massachusetts or Maryland or Missouri or North Carolina or New Jersey or New York or Ohio or Oregon or Pennsylvania or Texas or Virginia or Boston or Philadelphia or Chicago or Indianapolis or Columbus or St Louis or Kansas City or Raleigh or Durham or Houston or Dallas or Boulder or Portland or San Francisco or San Diego or Los Angeles
RemoteFull Time
PerkinElmer
PerkinElmer: Provides analytical instruments and laboratory services for scientific industries.
9+ YOEBachelor's in engineering, 9+ years automation experience in GMP life sciences, MES/ERP/LIMS/CMMS integration expertise, URS/FRS/DS documentation experience, ISA-88/ISA-95 and GAMP 5 knowledge, willingness to travel and valid driver’s license.
MES, ERP, LIMS, CMMS, DCS, PLC, SCADA, historians, Data Repositories, eBR, RbE, eLogbooks, ISA-88, ISA-95, GAMP 5, 21 CFR Part 11, FAT, SAT, IQ/OQ, PQ
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3w
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Automation Consulting Engineer
San Francisco, California, United States
$100k-$120k/yr FieldFull Time
Hamilton Storage
Hamilton Storage: Automated sample storage and management for life science research.
3+ YOEBachelor's degree,3+ years in technical consulting or pre-sales engineering,LEAN Six Sigma training,proficiency with Visio/AutoCAD and advanced Excel,experience with LIMS/LIS/ERP,ability to travel 40–60%.
Microsoft Visio, AutoCAD, Microsoft Excel, Microsoft Office Suite, HubSpot, LIMS, LIS, ERP
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1w
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Sr SampleManager Implementation Engineer
Indiana or New Brunswick or Chicago or Cambridge or Raleigh or Indianapolis or San Francisco or Houston or Philadelphia
$94k-$141k/yr RemoteFull Time
Thermo Fisher Scientific
Thermo Fisher ScientificNYSE: TMO: Sells equipment and chemicals for scientific research and healthcare.
7+ YOEBachelor’s degree or equivalent experience; 7+ years implementing LIMS/informatics solutions; SampleManager expertise, integrations, databases, troubleshooting, testing, deployment, and documentation.
SampleManager LIMS, SampleManager Integration Manager, Oracle, SQL Server, PostgreSQL, C#, .NET, SDLC, Quality Management Systems, GMP, GLP, FDA 21 CFR Part 11, ISO
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3mo
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Applied AI Engineer
Lincoln or San Francisco
$125k-$165k/yr RemoteFull Time
TELCOR
TELCOR: Provides healthcare software for laboratory and point-of-care operations.
4+ YOEPython experience; production AI applications; healthcare domain familiarity; LIS/LIMS, HL7/FHIR preferred; 4+ years in a technical role.
Python, HL7, FHIR, LIS/LIMS, REST API
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Research Engineer, Lab Automation
Menlo Park or San Francisco
$200k-$250k/yr OnsiteFull Time
Periodic Labs
Periodic Labs: Builds autonomous laboratories for AI-driven scientific discovery.
PhD or equivalent research experience in materials science, chemistry, chemical engineering, or related field; materials lab hardware expertise; Python proficiency; and ability to translate scientific workflows into automation requirements.
Python, Electronic Lab Notebooks, LIMS
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Senior Software Engineer, Scientific System of Record
Cambridge or San Francisco
$144k-$240k/yr OnsiteFull Time
Lila Sciences
Lila Sciences: Develops an AI platform for autonomous scientific research and discovery.
4+ YOEBachelor's or Master's in CS/Engineering, 4+ years engineering experience, strong in front-end or backend, TypeScript/React and Python experience, API and data modeling skills, production systems and cloud/DevOps familiarity.
TypeScript, React, Python, SQL, NoSQL, vector databases, data lakehouses, AWS, GCP, Azure, Kubernetes, Terraform, CloudFormation, GitHub Actions, Git, Flyte, Temporal, Airflow, Prefect, LIMS, ELN
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Associate Director, Principal Data Engineer
San Francisco, California, United States
$177k-$247k/yr HybridFull Time
Vir Biotechnology
Vir BiotechnologyNASDAQ: VIR: Developing medicines for infectious diseases and cancer.
12+ YOEBS/MS in a technical field and 12+ years in data or software engineering, scientific computing, cloud architecture, or applications; expertise in Python/Java, AWS, AI/ML, scientific data platforms, and technical leadership.
Python, Java, GPT, Claude, Gemini, LIMS, ELN, Experimenta, AWS, Databricks, Snowflake, Redshift, Spark, Airflow, Nextflow, SeqAssembler, HPD/dAIsY, SASTRY, OPAL Miner
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Scientific Data Engineer (Institutional Informatics Team - Joint Genome Institute)
Berkeley, California, United States
$117k-$174k/yr HybridFull Time, Temporary
Lawrence Berkeley National Laboratory
Lawrence Berkeley National Laboratory: Conducts multidisciplinary scientific research for the U.S. Department of Energy.
5+ YOEBachelor's degree or equivalent in computer science or related field, 5+ years' experience, Python, databases, data engineering, production systems, APIs, and scientific or operational data platforms; senior level requires 8+ years.
Airflow, Kafka, Python, Laboratory Information Management System (LIMS), Data Warehouse, Data Lakehouse, APIs
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Scientific Data Engineer (Institutional Informatics Team - Joint Genome Institute)
Berkeley, California, United States
$117k-$174k/yr HybridFull Time, Temporary
Lawrence Berkeley National Laboratory
Lawrence Berkeley National Laboratory: Conducts scientific research to address global challenges.
5+ YOEBachelor’s degree in Computer Science or related field, 5+ years’ experience developing production software and data systems, Python, databases, data engineering, APIs, and scientific workflows; senior level requires 8+ years.
Airflow, Kafka, Python, Laboratory Information Management System (LIMS), Laboratory Management System (LMS), Data Warehouse, Data Lakehouse, APIs
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2mo
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Research Associate - Vector Core
San Francisco, California, United States
$95k-$120k/yr OnsiteFull Time
Merge Labs
Merge Labs: Developing high-bandwidth non-invasive brain-computer interfaces using biotechnology.
Hands-on mammalian tissue culture and AAV production experience; QC assays (qPCR, ddPCR, SDS-PAGE), plasmid prep, ELN/LIMS documentation; BS/BA/MS in science or engineering preferred; SOP and automation experience.
ELN, LIMS
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Management Consulting Delivery Specialist , Scientific and Laboratory Informatics
Orlando or Milwaukee or Herndon or Dallas or Columbus or Kirkland or Irvine or Cincinnati or New York or Cleveland or Oklahoma City or Austin or Albany or Chicago or Arlington or St. Petersburg or Hartford or Pittsburgh or St. Louis or Miami or Sacramento or Raleigh or Minneapolis or Scottsdale or Mountain View or Morristown or San Francisco or Denver or Boston or Philadelphia or Des Moines or Overland Park or Los Angeles or Charlotte or Walnut Creek or Carmel or Seattle or Houston or Atlanta or Redmond or Bentonville or Beaverton or Nashville or Detroit or San Diego
$54k-$196k/yr OnsiteFull Time
Accenture
AccentureNYSE: ACN: Global provider of management consulting and technology services.
3+ YOE3+ years in scientific and laboratory informatics; Bachelor’s in a laboratory science, life science, computer science, or engineering; experience with laboratory solutions (LIMS, ELN, Benchling, LabWare, etc.) and consulting preferred; willing to travel up to 50%.
GenAI, Agentic SI, Agentic Lab Capabilities, Internet of Things (IoT), cloud, LIMS, ELN, CDS, SDMS, Benchling, Revvity Signals, Waters CDS/SDMS, Dotmatics, LabVantage, LabWare, SampleManager, Scitara, TetraScience
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3mo
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(CW) Manufacturing Associate (Temporary/Contract)
Novato, California, United States
OnsiteContract, Temporary
BioMarin
BioMarinNASDAQ: BMRN: Develops and commercializes therapies for rare genetic diseases.
2+ YOEBachelor’s in science/engineering or Associate’s in science/biotech with 2+ years in biotech manufacturing; cGMP knowledge; equipment operation; strong communication; shift-based work; lifting up to 25 lbs.
LIMS, MES, PI, TrackWise, ERP, biopharma equipment
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1mo
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(CW) Manufacturing Associate DAY SHIFT (Temporary/Contract)
Novato, California, United States
OnsiteMultiple Commitments Available
BioMarin Pharmaceutical
BioMarin PharmaceuticalNASDAQ: BMRN: Biotechnology developing therapies for rare genetic diseases.
2+ YOEBachelor's degree in science or engineering, or associate degree, or biotech certificate with 2+ years in biotech manufacturing or another regulated industry; process, documentation, quality, and teamwork skills.
Laboratory Information Management System (LIMS), Manufacturing Execution System (MES), PI, TrackWise, Enterprise Resource Planning (ERP)
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1mo
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Sr Prod Spec Cell Therapy Cell Culture - Berkeley, CA
Berkeley, California, United States
$94k-$141k/yr OnsiteFull Time
Bayer
BayerFrankfurt Stock Exchange: BAYN: Global enterprise focused on healthcare and nutrition.
5+ YOEBachelor's in life science or engineering, 5+ years cell therapy/biologics manufacturing experience, hands-on mammalian cell culture and aseptic cGMP operations, SUT experience, NPIs/tech transfer, data analysis/SPC, and controlled-document authoring.
MES, LIMS, electronic batch records, single-use technologies (SUT), statistical process control
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2mo
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Scientist II, ML - Guided Protein Design Evaluation
Emeryville, California, United States
$147k-$180k/yr HybridFull Time
Profluent
Profluent: Designs functional proteins using deep generative AI models.
5+ YOEPhD (or MS with equivalent industry experience) in molecular biology/related; 5+ years protein engineering and antibody discovery experience; strong NGS screening knowledge; ability to define assay QC and work across ML, bioinformatics, and experimental teams.
Python, pandas, SQL, LIMS
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1mo
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Sr Prod Spec Cell Therapy Cell Culture - Berkeley, CA
Berkeley, California, United States
$94k-$141k/yr OnsiteFull Time
Bayer
BayerFrankfurt Stock Exchange: BAYN: Global provider of healthcare medicines and agricultural products.
5+ YOEBachelor's in life science/engineering, 5+ years cell therapy/biologics manufacturing experience, hands-on mammalian cell culture and aseptic cGMP operations, single‑use tech experience, NPI/tech transfer support, documentation and commissioning experience.
MES, LIMS, electronic batch records, Single‑use technology (SUT)
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Advisor - Data Architect, Data Foundry
San Diego or San Francisco or Boston or Louisville or Indianapolis
$152k-$244k/yr OnsiteFull Time
Eli Lilly and Company
Eli Lilly and CompanyNYSE: LLY: Researches and manufactures medicines for human health.
2+ YOEM.S. or PhD in a STEM field with relevant data architecture/engineering or scientific informatics experience (MS+6 yrs or PhD+2 yrs). Expertise in data modeling, lakehouse and platform architecture, knowledge graphs, semantic web standards, cloud and streaming data patterns.
Databricks, Snowflake, Spark, dbt, Kafka, Kinesis, Flink, Neo4j, Amazon Neptune, TigerGraph, TileDB, MongoDB, Pinecone, Weaviate, pgvector, Delta Lake, Unity Catalog, RDF, OWL, SPARQL, Protégé, Benchling, C, C++, Rust, SQL, LIMS, ELN, HPC
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