44 machine learning scientist jobs at 30 companies in Vallejo, CA

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Machine Learning Scientist / Senior Machine Learning Scientist
South San Francisco, California, United States
$170k-$233k/yr OnsiteFull Time
Calico
Calico: Researching aging biology to develop longevity-improving therapies.
5+ YOEPhD in computational biology, bioinformatics, computer science, or related field; strong publication record; 0-5 years (Scientist) or 5+ years (Senior Scientist) in industry or academia; deep ML expertise; genomics knowledge; onsite four days/week.
Python, TensorFlow, PyTorch, Genomics data, DNA sequence analysis
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Machine Learning Scientist
San Francisco, California, United States
$180k-$270k/yr OnsiteFull Time
Tacit
Tacit: Developing advanced hardware to rethink human-computer interaction.
PhD or equivalent experience in ML/computational neuroscience, expertise in deep learning, proficiency in PyTorch/TensorFlow and Python, experience deploying models, strong communication and collaboration skills.
PyTorch, TensorFlow, Python
2w
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Staff Machine Learning Scientist
Brisbane, California, United States
$200k-$284k/yr HybridFull Time
Freenome
FreenomeNASDAQ: FRNM: Develops blood tests for early cancer detection using machine learning.
6+ YOEPhD in quantitative field with 6+ years post-PhD industry/postdoc experience in applied ML/DL; demonstrated publications or impact; proficiency in Python/R/C/C++/Java; experience with deep learning, supervised/self-supervised/contrastive learning.
Python, R, Java, C, C++, PyTorch, TensorFlow, JAX, Hugging Face, TensorBoard, MLflow, Weights & Biases, Docker, GCP, Microsoft Azure, AWS
1mo
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Machine Learning Scientist, Reinforcement Learning
Emeryville or Hybrid (2-3 days on-site)
$200k-$330k/yr HybridFull Time
Profluent
Profluent: Designs functional proteins using deep generative AI models.
PhD or equivalent in CS/ML/NLP/Applied Math/Computational Biology/Statistics; experience with ML/RL; publications; PyTorch or Jax experience.
PyTorch, Jax
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Staff Machine Learning Scientist
San Francisco, California, United States
$205k-$307k/yr HybridFull Time
Hinge Health
Hinge HealthNYSE: HNGE: Digital provider of musculoskeletal care and physical therapy
7+ YOEBachelor's in a quantitative field, 7+ years building and deploying ML systems at consumer scale, shipped recommendation/sequential-decision systems, strong experimentation and statistics, proficiency in Python and SQL.
Python, SQL, Statsig, Databricks, feature stores, Airflow, dbt, TypeScript
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Senior Scientist, Machine Learning (Biologics Design)
Foster City, California, United States
$169k-$219k/yr OnsiteFull Time
Gilead Sciences
Gilead SciencesNASDAQ: GILD: Develops and sells medicines for life-threatening infectious diseases.
2+ YOEPhD in a quantitative field with 2+ years' experience; strong Python and deep learning framework proficiency (PyTorch and/or JAX); experience training and evaluating representation, multimodal, geometric, or generative models; knowledge of protein structure and antibody biophysics.
Python, PyTorch, JAX, NumPy, pandas, Amber, OpenMM, Rosetta, CHARMM, ProteinMPNN
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Machine Learning Scientist - Quantum Chemistry
Welwyn or Basel or San Francisco
OnsiteFull Time
Roche
RocheSIX Swiss Exchange: ROG: Develops and manufactures pharmaceutical medicines and diagnostic solutions.
PhD or equivalent in a quantitative field; deep ML expertise; hands-on quantum chemistry experience (Psi4, PySCF, ORCA, xTB); fluent in Python and PyTorch or JAX; publication record; experience building scalable ML pipelines and synthetic datasets.
Psi4, PySCF, ORCA, xTB, Python, PyTorch, JAX, GitHub, GitLab
2mo
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Machine Learning Scientist - Apple Services Engineering, GenAI & ML Frameworks
San Francisco, California, United States
OnsiteFull Time
Apple
AppleNASDAQ: AAPL: Designs and sells consumer electronics, software, and online services.
Experienced ML scientist working on LLMs and GenAI, collaborating with product, infra, and foundation model teams to improve model reasoning, domain knowledge, tool use, and system integration.
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Senior Principal Machine Learning Scientist, AIBT
South San Francisco, California, United States
$203k-$377k/yr OnsiteFull Time
Roche
RocheSIX Swiss Exchange: ROG: Provides innovative pharmaceutical and diagnostic healthcare solutions.
7+ YOEPhD in a quantitative field, 7+ years post-PhD research experience building ML methods for biology; deep expertise in foundation models, sequence modeling, regulatory genomics, and proven scientific leadership and publication record.
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Senior Machine Learning Scientist I, Drug Discovery Analytics
Redwood City, California, United States
$229k-$269k/yr HybridFull Time
Revolution Medicines
Revolution MedicinesNASDAQ: RVMD: Developing precision oncology therapies for RAS-addicted cancers
6+ YOEPhD in a quantitative field; 6+ years applying ML to scientific datasets; expertise in Python and scientific libraries; experience with PyTorch/TensorFlow/scikit-learn, model development/validation, and noisy experimental data.
Python, NumPy, Pandas, SciPy, PyTorch, TensorFlow, scikit-learn, RDKit, OpenEye
2mo
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Machine Learning Scientist, Applied Machine Learning and Agentic AI, Pharma R&D
New York City or Boston or Redwood City or Chicago
$100k-$160k/yr OnsiteFull Time
Tempus AI
Tempus AINASDAQ: TEM: Builds a data platform for AI-powered precision medicine diagnostics.
3+ YOEPhD required (or Masters with 3+ years), strong AI/ML, agentic AI, oncology data, Python, LangGraph preferred, multimodal data, cloud deployment, excellent communication.
Python, LangGraph, Retrieval-Augmented Generation, LLM
1mo
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Senior Scientist, Machine Learning (Biologics Design)
Foster City, California, United States
$169k-$219k/yr HybridFull Time
Gilead Sciences
Gilead SciencesNASDAQ: GILD: Develops and sells medicines for life-threatening infectious diseases.
2+ YOEPhD in a quantitative discipline with 2+ years experience; proficiency in Python, deep learning (PyTorch/JAX), NumPy, pandas; experience architecting and evaluating deep learning models; knowledge of protein structure and antibody biophysics; demonstrated research productivity.
Python, PyTorch, JAX, NumPy, pandas, Amber, OpenMM, Rosetta, CHARMM, ProteinMPNN
3mo
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Machine Learning Research Engineer/Scientist
Redwood City, California, United States
OnsiteFull Time
Sunday
Sunday: Developing autonomous robots to perform household chores.
3+ YOE3+ years of ML work for robotics, Python and deep learning (PyTorch preferred), hands-on robot learning, data collection, and cross-functional collaboration.
Python, PyTorch, Machine Learning
1w
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Data Scientist/Machine Learning Engineer
Redwood City, California, United States
$125k-$150k/yr OnsiteFull Time
CATHEXIS
CATHEXIS: Provides consulting and technology services to federal government agencies.
2+ YOEBachelor's in CS/EE/Statistics (MS/PhD preferred), ~2 years relevant experience, strong Python and applied ML skills, scalable ML experience, strong math and communication skills.
Python, MapReduce, Amazon AWS, Microsoft Azure, Google Cloud Services
1mo
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Research Scientist - Machine Learning
San Francisco, California, United States
$150k-$250k/yr OnsiteFull Time
Extropic
Extropic: Developing thermodynamic computing hardware for energy-efficient AI.
Expertise in scientific Python and a deep learning framework, strong probability and linear algebra, publications in top ML venues, experience with training/deploying high-performance models and related infrastructure.
Python, C++, PyTorch, JAX, TensorFlow, Keras, Slurm, Ray, Weights & Biases, AWS, ONNX
2mo
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Senior Data Scientist + Machine Learning Engineer
Palo Alto or San Francisco
$190k-$210k/yr RemoteFull Time
Neo.Tax
Neo.Tax: Automating enterprise accounting and R&D tax credit calculations.
6+ YOE6+ years in data science / ML shipping production models; strong Python, SQL; experience building data pipelines; production ML, experimentation, and cross-functional collaboration.
Python, NumPy, Pandas, scikit-learn, PyTorch, TensorFlow, SQL, Airflow
2w
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Senior Machine Learning Engineer, Agent Oversight
San Francisco or New York City
$216k-$270k/yr OnsiteFull Time
Scale AI
Scale AI: Provides data and infrastructure for training artificial intelligence models.
5+ YOE5+ years as an ML engineer or applied scientist with production ML/LLM systems; experience building evaluation/monitoring or continuous-learning infrastructure; strong experimentation and collaboration skills.
LLMs, RLHF, SFT
2mo
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Staff Machine Learning Engineer (Research Scientist) - DFAI
San Francisco or New York City or Seattle
$249k-$368k/yr HybridFull Time
Plaid
Plaid: Provides financial data connectivity and payment infrastructure via APIs.
7+ YOESenior ML engineer with 7–12+ years (MS) or 5–9+ years (PhD); strong technical leadership; expertise in transformers/LLMs; end-to-end production ownership; Python and software engineering fundamentals; fintech domain experience a plus.
Python, PyTorch, TensorFlow, Distributed training, Pretraining infrastructure, ML platforms
4mo
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Machine Learning Scientist - Natural Language Processing (NLP) - Vice President - Machine Learning Center of Excellence
Palo Alto or New York or Seattle
$164k-$260k/yr OnsiteFull Time
JPMorgan Chase
JPMorgan ChaseNYSE: JPM: Global financial services firm providing banking and investment solutions.
3+ YOEPhD with 3+ years or MS with 5+ years in ML/GenAI; strong GenAI, ML/DL, Python tooling; experimental design and production deployment experience.
TensorFlow, PyTorch, NumPy, Scikit-Learn, Pandas
1mo
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Senior research Scientist - Machine Learning Systems & Efficiency Engineer
Seattle or San Francisco or San Jose
$143k-$271k/yr OnsiteFull Time
Adobe
AdobeNASDAQ: ADBE: Provides software for digital media creation and marketing analytics
Master's or PhD in CS/EE or related; deep expertise in ML systems, distributed inference, GPU performance, and production deployment; proficiency in Python and C++; experience with Triton/CUDA and performance profiling.
Triton, CUDA, PyTorch Profiler, NVIDIA Nsight, vLLM, SGLang, xDiT, TensorRT, ONNX Runtime, AOTI, NCCL, Docker, Kubernetes, Python, C++, Linux