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51 research software engineer jobs at 38 companies in Framingham, MA

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Research Engineer
Cambridge or London
OnsiteFull Time
Dayhoff Labs
Dayhoff Labs: AI-driven discovery for synthetic biology and chemical processes.
Use LLMs and agents to build software and systems, self-host and evaluate open-source models, strong Python, version control and testing, and ability to work across unfamiliar codebases.
LLMs, Python, AWS, GCP
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2mo
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Lead Software Engineer
Boston, Massachusetts, United States
$90k-$180k/yr HybridFull Time
Wellington Management: Manages investment portfolios and provides financial research for institutions.
5+ YOE5–10 years of software engineering experience; strong Python and C# skills; experience with cloud and relational databases; able to work with researchers and portfolio managers; BS in CS/Engineering/Mathematics or related field.
Python, C#, Git, APIs, SQL Server, AWS, Azure
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2mo
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Research Engineer - Formal Methods
Boston or San Francisco or United States
HybridFull Time
Code Metal
Code Metal: Verifiable AI-powered code translation for mission-critical industries.
Advanced degree (Master's or PhD) in CS/Math/software engineering, strong programming in Python/C/C++/Rust, familiarity with theorem provers, static analyzers, and property-based testing, and ability to obtain U.S. Top Secret clearance.
Python, C, C++, Rust, PVS, Coq, Lean, SMT solvers, Frama-C, Infer, Polyspace, QuickCheck, Hypothesis
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1mo
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Project Software Engineer / Project Software Developer
Chelmsford, Massachusetts, United States
$95k-$120k/yr FieldFull Time
Triton Systems
Triton Systems: Develops and commercializes advanced technology for defense and aerospace.
5+ YOEU.S. citizen with Secret clearance (or ability to obtain), 5+ years software development, strong C++ proficiency, experience transforming research code to production, AI/ML experience, familiarity with secure coding, Git/Subversion, and technical writing.
C++, Python, MATLAB, Java, Git, Subversion
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Applied AI Research Engineer - Model Cost Optimization
Cambridge, Massachusetts, United States
$210k-$260k/yr OnsiteFull Time
Blitzy
Blitzy: Autonomous AI platform for enterprise software development.
Applied ML/AI research experience with hands-on LLM evaluation or fine-tuning, strong software engineering, familiarity with LLM evaluation and benchmarking, and understanding of inference cost/latency tradeoffs.
LLM
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2mo
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Lead Research Engineer I - Mission Autonomy & Global Effects
Burlington, Massachusetts, United States
$150k-$196k/yr HybridFull Time
Scientific Systems Company (SSCI)
Scientific Systems Company (SSCI): Provides AI-powered autonomy and mission planning for unmanned systems.
7+ YOEBSc (7+ yrs) or MS (5+ yrs) or PhD (2+ yrs) in a quantitative field, team leadership and program/proposal experience, software development for edge platforms, experience with C/C++, Python (Java/Rust), simulation tools (AFSIM, NGTS), and ability to obtain a U.S. DoD security clearance.
C/C++, Python, Java, Rust, AFSIM, NGTS, Linux
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2mo
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Staff Reinforcement Learning Research Engineer
Waltham, Massachusetts, United States
$155k-$200k/yr OnsiteFull Time
Boston Dynamics
Boston Dynamics: Building advanced mobile robots for industrial and warehouse automation.
3+ YOEMS with 3+ years or PhD in ML, Robotics; deployed policies on physical robots; RL toolbox and simulation expertise; PyTorch/JAX; software fundamentals
Reinforcement Learning Toolboxes (RSL-RL, CleanRL, RLlib, Stable Baselines), Simulation and Rendering Tools (Isaac Lab, MuJoCo, MjWarp, MjLab), PyTorch, JAX, ONNX, Triton, TensorRT, Bazel, Docker, CI/CD
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22h
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Staff Research Engineer, Scientific Computing and ML/Physics Infrastructure
Cambridge or London or San Francisco
$224k-$294k/yr OnsiteFull Time
Lila Sciences
Lila Sciences: Develops an AI platform for autonomous scientific research and discovery.
Strong software engineering in Python, experience with ML/scientific computing, distributed systems, GPU performance, PyTorch/JAX/CUDA, Linux and containers, orchestration systems, and working with research teams.
Python, PyTorch, JAX, CUDA, Linux, Docker, Kubernetes, Slurm, Ray, Flyte, Argo, CI
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1mo
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Principal Engineer
Cambridge, Massachusetts, United States
$188k-$259k/yr OnsiteFull Time
Flagship Pioneering
Flagship Pioneering: Conceives, creates, and builds life science platform companies
Senior individual-contributor software engineer experienced owning production ML/AI systems, designing distributed system architecture, deploying data infrastructure, and partnering with scientists and ML researchers.
Claude Code, Greenhouse
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1mo
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Senior Software Engineer, Autonomous Lab (Scheduling & Optimization)
Boston or Emeryville or West Sacramento
$134k-$190k/yr HybridFull Time
Ginkgo Bioworks
Ginkgo BioworksNYSE: DNA: Designs custom microorganisms and cells for industrial manufacturing.
Experience building production scheduling/optimization systems, strong Python, knowledge of operations research/constraint programming, bachelor's/master's in CS/OR/IE or equivalent experience, strong communication and collaboration skills.
Python, OR-Tools, Gurobi, CPLEX, OptaPlanner, Kafka, Temporal, Kartana-Arrokuda
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3w
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Scientific Software Engineer - AMO Simulations
Boston, Massachusetts, United States
OnsiteFull Time
QuEra Computing
QuEra Computing: Develops and operates neutral-atom quantum computing systems.
Advanced degree or equivalent experience in physics, math, CS or related; strong background in quantum/AMO physics and numerical simulation; programming in Python/Julia/C++/Rust; familiarity with numerical linear algebra and scientific software practices.
Python, Julia, C++, Rust, QuantumOptics.jl, QuTiP, SciPy, NumPy, ITensor, CUDA, MPI
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3w
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Temporary Research Associate
Worcester, Massachusetts, United States
$35/hr HybridPart Time
Worcester Polytechnic Institute
Worcester Polytechnic Institute: Private research university focused on science, engineering, and technology.
Biomedical engineering background with knowledge of neuronal activation and synaptic interactions; NEURON software is a plus.
NEURON
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1mo
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Director, Software Engineering – Research & Advanced Development
Bedford, Massachusetts, United States
$210k-$295k/yr OnsiteFull Time
Berkshire Grey
Berkshire Grey: Sells AI robotic systems for warehouse and logistics automation.
10+ YOE3+ MgmtMaster's in robotics/CS/ML/AI, 10+ years software development experience (robotics/automation preferred), 3+ years technical leadership, strong Python/C++ skills, experience with real robotic systems and evaluating AI/ML robotics capabilities.
Python, C++, ROS, ROS2, PyTorch, Isaac Sim, Isaac Lab, MuJoCo
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3w
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Pr Embedded Software Test Engineer
Danvers, Massachusetts, United States
$117k-$201k/yr OnsiteFull Time
Johnson & Johnson
Johnson & JohnsonNYSE: JNJ: Global healthcare providing pharmaceuticals and medical technologies.
6+ YOEM.S. or equivalent; 6+ years manual and automated testing on embedded RTOS platforms; 2+ years Python and Windows shell scripting; FDA cybersecurity knowledge; test fixture design; Jira/Jenkins/Jama/GitLab experience.
Python, Windows Shell, Jira, Jenkins, Jama, GitLab, QNX, SAP Product Lifecycle Management, CI/CD
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3w
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Pr Embedded Software Test Engineer
Danvers, Massachusetts, United States
$117k-$201k/yr OnsiteFull Time
Johnson & Johnson
Johnson & JohnsonNYSE: JNJ: Develops and manufactures pharmaceutical drugs and medical devices.
6+ YOEM.S. or equivalent,6+ years embedded manual and automated testing experience,2+ years Python and Windows shell scripting,FDA cybersecurity familiarity,fixture design and test automation,ability to travel 5%.
Python, Windows Shell, Jira, Jenkins, Jama, Gitlab, QNX, SAP Product Lifecycle Management
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2mo
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Senior Research Scientist, Machine Learning
Boston, Massachusetts, United States
$170k-$216k/yr HybridFull Time
Analog Devices
Analog DevicesNASDAQ: ADI: Designs and manufactures semiconductors for signal processing and power management.
2+ YOEMaster’s degree in CS/IT/EE or related field; 2+ years ML R&D; ML frameworks (TensorFlow, PyTorch, Keras, etc.); neural networks/transformers; Python/C/C++ software engineering.
TensorFlow, Keras, PyTorch, Caffe, JAX, Python, C/C++, Neural Networks, Transformers
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3mo
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Research Techician - Tothova Lab
Boston, Massachusetts, United States
$48k-$51k/yr OnsiteFull Time
Dana-Farber Cancer Institute
Dana-Farber Cancer Institute: Provides comprehensive cancer treatment and conducts oncological research.
0+ YOEBachelor’s degree in life sciences or related field; basic lab experience; strong communication and organization skills.
laboratory equipment, computers, sequencers, microscopes, lab consumables
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3w
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Machine Learning Engineer
Boston, Massachusetts, United States
$136k-$225k/yr HybridFull Time
Red Hat
Red Hat: Provides enterprise-grade open source software and cloud solutions.
2+ YOE2 years experience developing and refactoring Python code, applying software engineering practices, debugging, implementing basic testing, and translating research code into production-quality modules; Bachelor's in CS/Math or related.
Python
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2mo
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AI Engineer
New York or Los Angeles or Boston or Jersey City or Houston
$115k-$130k/yr RemoteAll Commitments Available
Makai Labs
Makai Labs: Provides AI-powered enterprise automation and human-machine teaming solutions.
Hands-on AI engineer with Python skills; experience building AI apps; internship/coursework/research or projects; ability to prototype and iterate quickly.
Python, API development, Backend services, Workflow automation, FastAPI/Flask, React/TypeScript, Docker, Testing (Python/TypeScript), LLM retrieval/search
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2mo
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Staff Engineer
Boston or Las Vegas or Pittsburgh or United States
$205k-$272k/yr HybridFull Time
Motional
Motional: Develops autonomous vehicle technology for driverless ride-hailing and delivery.
Advanced ML/engineering leader with experience designing, developing, and deploying ML solutions for autonomous vehicles; proficiency in TensorFlow or PyTorch, Python, software engineering best practices, and proven leadership on large technical initiatives.
TensorFlow, PyTorch, Python, C++, CUDA
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