31 proteomics jobs at 21 companies in Massachusetts
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Proteomics Scientist
Boston, Massachusetts, United States
OnsiteFull Time
Proxima: Uses AI to design proximity-based medicines for undruggable proteins.
Experience in mass‑spec sample prep and proteomics workflows, ability to operate/maintain LC/MS (Thermo Fisher Neo Vanquish, Orbitrap/Astral), collaborate with computational teams, and document scientific data.
LC/MS, Thermo Fisher Neo Vanquish LC, Orbitrap, Astral
2mo
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Senior Scientist or Principal Scientist, Targeted Proteomics
Watertown, Massachusetts, United States
$115k-$215k/yr OnsiteFull Time
2+ YOEPhD in Biochemistry/Biology/Chemistry or Chemical Biology with 2+ years in targeted proteomics; or BS/MS with 8+ years of relevant experience.
LC-MS, nanoLC, Orbitrap, Skyline, PRM, MRM, Mass Spectrometry, Immunoaffinity enrichment
3w
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Scientist/Senior Scientist, Discovery Biology and Proteomics
Watertown, Massachusetts, United States
OnsiteFull Time
4+ YOEPhD and 4+ years postdoctoral or industry experience in mass spectrometry-based proteomics; hands-on LC-MS/MS instrument operation; experience with bottom-up proteomics, affinity pulldown/AP-MS, CETSA/TPP, chemical biology tools, and strong communication skills.
LC-MS/MS, MaxQuant, DIA-NN, Spectronaut, Skyline, orbitrap, tribrid, timsTOF
1mo
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Field Applications Scientist, Proteomics (Remote - Boston)
Boston or Waltham
$83k-$130k/yr RemoteFull Time
3+ YOEProvide technical support and training for Olink proteomics products; method development, troubleshooting, and application development; Bachelor's (5+ yrs) or Advanced degree (3+ yrs) in chemistry/biochemistry/molecular biology or related; strong communication and presentation; willingness to travel 25–50%.
Olink
1mo
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Postdoctoral Associate, Pulmonary Center, Department of Medicine
Boston, Massachusetts, United States
$68k-$75k/yr OnsiteFull Time
Postdoctoral research in immunology/host–pathogen interactions; experience with experimental immunology, mouse infection models, and transcriptomic or proteomic approaches preferred.
scRNA-Seq, TOTAL-Seq, phospho-/proteomics, proteomics
4w
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Discovery Postdoctoral Fellow in Neuroscience
Cambridge, Massachusetts, United States
$87k/yr OnsiteFull Time
PhD conferred in 2026 in neuroscience/biology, experience with human iPSC neuronal/glial models, proteomics, multi-omics integration, confocal and high-content imaging, and independent research.
human iPSC, confocal microscopy, high-content imaging, proteomics, transcriptomics, genomics, Halo µMapping
2w
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Scientist II/Sr. Scientist I, Chemical Biology
Boston, Massachusetts, United States
$145k-$185k/yr OnsiteFull Time
2+ YOEPhD in relevant field with 2+ years industry/postdoc experience; proficiency operating mass spectrometry and HPLC; experience with MS-based proteomics; programming (Python or R) desirable; capable of routine lab tasks.
HPLC, Mass Spectrometry (MS), Proteome Discoverer, Skyline, DIA-NN, Spectronaut, MaxQuant, Python, R
2mo
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Senior Scientist
Waltham, Massachusetts, United States
$120k-$150k/yr OnsiteFull Time
4+ YOEPhD in proteomics or related field; 4+ years industry proteomics/translational biomarker experience; mass spectrometry expertise; collaboration with cross-functional teams; data interpretation skills.
Mass spectrometry, LC-MS/MS, Proteomics platforms, Bioinformatics tools
3mo
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Research Assistant III- Technology Development
Boston, Massachusetts, United States
OnsiteFull Time
2+ YOEBachelor’s in biological science; 2+ years molecular biology/biochemistry; Python/R; experience with NGS libraries or proteomics; full-time.
Python, R, NGS, Mass spectrometry, Liquid handling automation
1w
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Postdoctoral Investigator
Woods Hole, Massachusetts, United States
$68k-$75k/yr HybridFull Time
PhD in chemistry, oceanography, or related field; experience in proteomics and data analysis; strong written and oral communication; ability to work independently and collaboratively.
Python
2d
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Graduate Student - Haas-Kogan lab
Boston, Massachusetts, United States
$41k-$50k/yr OnsiteFull Time
Assisting with de-identification, standardization, and uploading of imaging, genomics, proteomics, and dosimetry data to the NCI Cancer Research Data Commons; may support wet-lab experiments.
Cancer Research Data Commons (CRDC)
1mo
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Bioinformatician - Open Rank
Worcester, Massachusetts, United States
$50k-$110k/yr OnsiteFull Time
0+ YOEDesign and maintain bioinformatics pipelines, analyze large genomics/proteomics datasets, develop custom scripts and tools, and collaborate with researchers; strong programming and data‑analysis background required.
Perl, C++, R, MySQL, Java, Python, Linux, Shell, NumPy, pandas, polars, matplotlib, Jupyter, SQL, Nextflow, Snakemake, SAM, BAM, CRAM, Parquet, HDF5, AWS, HTML, CSS, JavaScript, Django, Go, Rust, GitHub
1mo
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Postdoctoral Research Fellow
Boston, Massachusetts, United States
$60k-$76k/yr OnsiteFull Time
0+ YOEDoctoral degree or M.D.; 0-1 years postdoctoral research experience; strong quantitative/computational skills in human genetics, proteomics, metabolomics, and cohort data; ability to develop independent projects and publish.
3w
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Scientist, Computational Biology
Cambridge, Massachusetts, United States
$115k-$165k/yr OnsiteFull Time
2+ YOEPhD in computational biology or related field, 2+ years industry experience, strong mass-spec proteomics and multi-omics analysis, proficiency in R or Python, statistical and ML expertise, NGS experience.
R, Python, NGS, transformers, Greenhouse
4w
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Discovery Postdoctoral Fellow in Neuroscience
Cambridge, Massachusetts, United States
$58k-$107k/yr OnsiteFull Time
PhD (conferred 2026) in neuroscience/biology or related field, experience with human iPSC neuron–glia models, confocal and high‑content imaging, proteomics/transcriptomics and multi‑omics analysis, strong publication record.
Artificial Intelligence, Machine Learning (ML), Halo µMapping, confocal microscopy, high-content imaging
1w
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sRAM Spatial Regional Account Manager (North East)
Boston, Massachusetts, United States
$88k-$141k/yr FieldFull Time
5+ YOEMS or BS in molecular biology/biochemistry or related, 5+ years field sales experience selling capital equipment, spatial genomics/proteomics knowledge preferred, strong CRM and presentation skills, ability to travel 50–75%.
CRM, Miller Heiman
1mo
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Mass Spectrometry Scientist
Watertown, Massachusetts, United States
$86k-$119k/yr OnsiteFull Time
Convergent Research: Incubates and operates non-profit Focused Research Organizations to solve scientific bottlenecks.
5+ YOEMasters or PhD in Biology/Chemistry/Biochemistry; 5+ years maintaining mass spectrometers; experience optimizing LC-MS/MS for bottom-up proteomics (DDA/DIA); lab prep, instrument maintenance, experiment design; Python/R proficiency preferred.
Thermo, Bruker, Sciex, LC-MS/MS, Python, R
4w
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sRAM Spatial Regional Account Manager (North East)
Boston, Massachusetts, United States
$79k-$141k/yr FieldFull Time
5+ YOEMS or BS in molecular biology/biochemistry or related field; 5+ years field experience selling capital equipment and consumables; strong knowledge of spatial genomics/proteomics preferred; CRM experience and strong communication, presentation, and sales process skills; ability to travel 50–75%.
CRM, Miller Heiman
2mo
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Senior Scientist I - Mass Spectrometry/Protein Characterization (Cambridge, Massachusetts, US)
Cambridge, Massachusetts, United States
$118k-$154k/yr HybridFull Time
6+ YOEAdvanced LC/MS expertise for intact protein and peptide mapping, experience with Waters and Thermo instrumentation and software, peptide mapping/PTM knowledge, data analysis tools, and ability to mentor scientists; PhD or BS/MS with extensive industry experience.
LC/MS, Waters Connect, Thermo Scientific Xcalibur, Thermo Orbitrap, UPLC, ProteinMetrics Byos, Biopharma Finder, Proteome Discoverer, analytical SEC, SEC-MALS, mass photometry, FidaNeo, NanoDSF
2mo
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Principal Data Scientist - Immunology - (2 positions)
Titusville or Cambridge or Raritan or Spring House or San Diego
$117k-$201k/yr HybridFull Time
5+ YOEPrincipal Data Scientist with bioinformatics/biomedical data expertise; 5+ years health informatics; semantic tech, ontologies, knowledge graphs; PhD or Master preferred.
Semantic Web, SPARQL, RDF, OWL, Graph Databases, Neo4j, Amazon Neptune, REST, GraphQL, Docker, CI/CD, Jenkins, GitLab, Azure DevOps, SQL, NoSQL, Proteomics, Genomics
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